y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_40.35 |
Family | GT47 |
Protein Properties | Length: 608 Molecular Weight: 68734.5 Isoelectric Point: 9.8224 |
Chromosome | Chromosome/Scaffold: 40 Start: 642471 End: 644934 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 354 | 564 | 0 |
RVLKVYVYKEGQKPIFHQPKMRGIYASEGWFMKLIEGNKNFIVRDPRKAHLFYLPVSIKNLRSALGQDFQSPNDLKGSLRKYAELIAGKHKFWNRTGGAD HFLAACHDWAPKLTKPHMKNCIRALCNANAAEGFNIGKDTTLPVTYIRSAEAPLEHLGGKPSSERHILAFFAGSMHGYLRPILLEYWEKKEADMKIFGPL PRDNERAQKLQ |
Full Sequence |
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Protein Sequence Length: 608 Download |
MVLQQVDFHM VAFYVVPKGL ISLPLQSFGM DVLVQSQNLR HVEIRRLVLI MGTVVAAVVV 60 LQCSVLANWK SIFVSSPDKG SIAFVISNET ILDDSRFTLV NTSDSYEEGE YEKEYDGEKE 120 DYDLTLDFNK HLGDSFKSKD QNSRKESILG KSISNGNSLL IGNVARMKNS SSQTRTIEMG 180 HNFLEPGEKK VKSYTINDEA KASNFSGTAR VASSQDPVQE IEDLNTNSGS SDVVTVMSLT 240 GNVKQTMETQ QESNELLQTL SVILTNNSLK ARISLLKRRK KQSISINQMD TIFARGLISS 300 HSVRPRWSSP RDRELLSAKR EIENAPTLRD IPGLYTSVFR NISRFRRSYD LMERVLKVYV 360 YKEGQKPIFH QPKMRGIYAS EGWFMKLIEG NKNFIVRDPR KAHLFYLPVS IKNLRSALGQ 420 DFQSPNDLKG SLRKYAELIA GKHKFWNRTG GADHFLAACH DWAPKLTKPH MKNCIRALCN 480 ANAAEGFNIG KDTTLPVTYI RSAEAPLEHL GGKPSSERHI LAFFAGSMHG YLRPILLEYW 540 EKKEADMKIF GPLPRDNERA QKLQRAHEKQ QVLHMCKGVC SRERYPEFEK HSAINLGREV 600 HSNAVKS* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-27 | 352 | 557 | 226 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08970.1 | 0 | 248 | 582 | 122 | 452 | unnamed protein product [Arabidopsis thaliana] |
EMBL | CAN76867.1 | 0 | 28 | 554 | 708 | 1264 | hypothetical protein [Vitis vinifera] |
EMBL | CAN76867.1 | 0 | 30 | 576 | 1 | 604 | hypothetical protein [Vitis vinifera] |
EMBL | CBI28021.1 | 0 | 30 | 576 | 1 | 556 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280595.1 | 0 | 39 | 576 | 8 | 554 | PREDICTED: hypothetical protein [Vitis vinifera] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |