y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_43.87 |
Family | GT47 |
Protein Properties | Length: 564 Molecular Weight: 63922 Isoelectric Point: 6.8399 |
Chromosome | Chromosome/Scaffold: 43 Start: 1153555 End: 1160146 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 124 | 434 | 0 |
IRIYVYDMPSKFTYDLLWLFRNTYRETSNLTSNGSPVHRLIEQHSIDYWIWADLIAPESERVLKNVVRVHEQEEADLFYVPFFTTISFFLLEKQDCKALY REALKWVTDQPAWKRSEGRDHIFPIHHPWSFKSVRRNVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDLCDVKCISDTASTRTTLLFFRGRLK RNAGGKIRAKLVAELGGAEGVVMEEGTAGEGGKAAAQDGMRRSIFCLSPAGDTPSSARLFDAIVSGCLPVIVSDELELPFEGILDYRKIAIFVSSSDAVQ PGWLLSFLKSI |
Full Sequence |
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Protein Sequence Length: 564 Download |
MPAKQIHPQS RPKSSILIFA LTLFVLSLIF VLLSLSSSSF SSSSSSFSRT PVTYSNLQVE 60 PETSFVASLE NFLTQKVPKP SSPVRDDTVR TVREEDVKRL DDLKYRSERN WLHRDQSYPL 120 NFPIRIYVYD MPSKFTYDLL WLFRNTYRET SNLTSNGSPV HRLIEQHSID YWIWADLIAP 180 ESERVLKNVV RVHEQEEADL FYVPFFTTIS FFLLEKQDCK ALYREALKWV TDQPAWKRSE 240 GRDHIFPIHH PWSFKSVRRN VKNAIWLLPD MDSTGNWYKP GQVSLEKDLI LPYVPNVDLC 300 DVKCISDTAS TRTTLLFFRG RLKRNAGGKI RAKLVAELGG AEGVVMEEGT AGEGGKAAAQ 360 DGMRRSIFCL SPAGDTPSSA RLFDAIVSGC LPVIVSDELE LPFEGILDYR KIAIFVSSSD 420 AVQPGWLLSF LKSISPSKIR EMQMNLGQHS RHFVFSSPAQ PLGPEDLVWR MQWGHDFFEP 480 VWGRCKLAIE KYKVNGGMIN QLLQEVQNFH GDHEKAYMDV LEGNYGPLNM LEGGLEDAEE 540 FGSVCSMLPI YGAARAWKNL GPG* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-62 | 123 | 434 | 320 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20132.1 | 0 | 131 | 474 | 1 | 344 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197191.1 | 0 | 10 | 474 | 13 | 468 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002285599.1 | 0 | 61 | 474 | 62 | 478 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325382.1 | 0 | 41 | 474 | 37 | 468 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520033.1 | 0 | 48 | 474 | 43 | 469 | catalytic, putative [Ricinus communis] |