| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_48.169 |
| Family | CE8 |
| Protein Properties | Length: 278 Molecular Weight: 31243.4 Isoelectric Point: 4.6302 |
| Chromosome | Chromosome/Scaffold: 48 Start: 981575 End: 983459 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 42 | 220 | 0 |
| IVVDQRGGEKIFTRVQEAIDSIPSPNNAWIKIQINPGVYTEKVTIPQEKPCIVLEGRSPRITVITYDDHEATDTSSTFTSFPDNIVVQGITFKNSFNRKA LMAAQALREKKEIDDYRDEMIIKQAVAARVFGDKVAFFESGFIGLQDTLWDVQGRHYFHNCYIEGAIDFIFGSGQSIYD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 278 Download |
| MELSVPLSTK LLLIFSLLSV FLEISTAVDC KYGDSQSVVY TIVVDQRGGE KIFTRVQEAI 60 DSIPSPNNAW IKIQINPGVY TEKVTIPQEK PCIVLEGRSP RITVITYDDH EATDTSSTFT 120 SFPDNIVVQG ITFKNSFNRK ALMAAQALRE KKEIDDYRDE MIIKQAVAAR VFGDKVAFFE 180 SGFIGLQDTL WDVQGRHYFH NCYIEGAIDF IFGSGQSIYD VRYNIMFAEI NCSGPGADGD 240 GRVGWRKDVN GDDLRRYFSI PSFIDQDGWI ARLPCWD* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02682 | PLN02682 | 0.0001 | 225 | 270 | 46 | + pectinesterase family protein | ||
| PLN02176 | PLN02176 | 1.0e-7 | 224 | 274 | 51 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 6.0e-42 | 40 | 220 | 191 | + pectinesterase family protein | ||
| PLN02176 | PLN02176 | 2.0e-53 | 33 | 220 | 188 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 4.0e-56 | 41 | 220 | 180 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002318946.1 | 0 | 3 | 220 | 1 | 209 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330032.1 | 0 | 6 | 220 | 4 | 194 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515259.1 | 0 | 26 | 220 | 23 | 205 | pectinesterase, putative [Ricinus communis] |
| RefSeq | XP_002529267.1 | 0 | 35 | 245 | 33 | 221 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002529267.1 | 0.000001 | 224 | 274 | 288 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.00000000000003 | 37 | 214 | 3 | 162 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 0.00000000000005 | 37 | 262 | 1 | 211 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000000000005 | 37 | 262 | 1 | 211 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.00000000000006 | 37 | 262 | 1 | 211 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_A | 0.00000000000006 | 37 | 262 | 1 | 211 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV030104 | 178 | 42 | 219 | 3.00018e-42 |
| DY006740 | 178 | 42 | 219 | 4.00001e-40 |
| DK492309 | 178 | 42 | 219 | 5e-40 |
| EX687561 | 190 | 31 | 220 | 8.99999e-40 |
| DV456072 | 175 | 27 | 199 | 2e-39 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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