Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_48.57 |
Family | GH2 |
Protein Properties | Length: 975 Molecular Weight: 110284 Isoelectric Point: 6.6095 |
Chromosome | Chromosome/Scaffold: 48 Start: 313115 End: 320253 |
Description | glycoside hydrolase family 2 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH2 | 38 | 757 | 0 |
AESPWMEAVVPGTVLATLVKNKVVPDPFYGLENETIIDIGDSGREYYTFWFFTTFQSKLLENQHLHLNFRGINYSAELYLNGHEKVLPKGMFRRHSLDVT NIVHPDGKNLLAVLVHPPDHPGKIPAEGGQGGDHEIGKDVATQYVEGWDWIAPIRDRNTGIWDEVSISVTGPVKIIDPHLVSSLFDNYKRVYLHATTELE NTTDSVVECSLNIQVSTELEENICLLEHLQTQQVSIPAHGRVQHTFPQLFFYKPNLWWPNGMGKQSLYEVSITVDVKGHGESDFWSQPFGFRKIESYIDS ATGGRLFKVNGQRIFIRGGNWILSDGLLRLSRERYRADIKFHADMNFNMIRCWGGGLTERPEFYHYCDIYGLLVWQEFWITGDVDGRGIPISNPNGPLDH DLFLLCARDTIKLLRNHPSLALWVGGNEQVPPDDLNKALKSYLKLHPLFQNSDPNDKSVEDLSAGSKDPSQYLDGTRIYIQGSLWDGFADGKGGFTDGPY DIQNPEDFFKDDYYKYGFIPEVGSVGMPVAATIRATMPVEGWQIPLFKKLPNGYVEEIPNPIWEYHKYIPYSKPGKVHDQILKYGMSKDLDDFCLKAQLA NYIQYRALLEGWTSHMWSKYTGVLIWKNQNPWTGLRGQFYDHLLDQTAGFYGCRSAAEPIHIQLNLATYFIEVVNTMSEELTNVAIEASVWNLDGSCPYY KVIDNVSVPPKKVVPIVEMK |
Full Sequence |
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Protein Sequence Length: 975 Download |
MSGIGKTVLD SGWLAARSTE VKLSGVQLTT THPPATGAES PWMEAVVPGT VLATLVKNKV 60 VPDPFYGLEN ETIIDIGDSG REYYTFWFFT TFQSKLLENQ HLHLNFRGIN YSAELYLNGH 120 EKVLPKGMFR RHSLDVTNIV HPDGKNLLAV LVHPPDHPGK IPAEGGQGGD HEIGKDVATQ 180 YVEGWDWIAP IRDRNTGIWD EVSISVTGPV KIIDPHLVSS LFDNYKRVYL HATTELENTT 240 DSVVECSLNI QVSTELEENI CLLEHLQTQQ VSIPAHGRVQ HTFPQLFFYK PNLWWPNGMG 300 KQSLYEVSIT VDVKGHGESD FWSQPFGFRK IESYIDSATG GRLFKVNGQR IFIRGGNWIL 360 SDGLLRLSRE RYRADIKFHA DMNFNMIRCW GGGLTERPEF YHYCDIYGLL VWQEFWITGD 420 VDGRGIPISN PNGPLDHDLF LLCARDTIKL LRNHPSLALW VGGNEQVPPD DLNKALKSYL 480 KLHPLFQNSD PNDKSVEDLS AGSKDPSQYL DGTRIYIQGS LWDGFADGKG GFTDGPYDIQ 540 NPEDFFKDDY YKYGFIPEVG SVGMPVAATI RATMPVEGWQ IPLFKKLPNG YVEEIPNPIW 600 EYHKYIPYSK PGKVHDQILK YGMSKDLDDF CLKAQLANYI QYRALLEGWT SHMWSKYTGV 660 LIWKNQNPWT GLRGQFYDHL LDQTAGFYGC RSAAEPIHIQ LNLATYFIEV VNTMSEELTN 720 VAIEASVWNL DGSCPYYKVI DNVSVPPKKV VPIVEMKYPK SRNPKPVYFL LLKLYNISDY 780 SIISRNFYWL HLSNGDYKLL EPYRRKKIPL KITSKTFITG STYEIEMRVQ NASKKPDSIS 840 SICLNNFTTK YGDGHSGVSM AEPVGSETEG KSKPGLLHRV YKTFSRETNG LRVSEVNGVD 900 SGVAFFLHFS VHASKTHYKE GEDARILPVH YSDNYFSLVP GEVMPIKISF EVPPGVTPRV 960 ILKGWNYHDG HTVI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02836 | Glyco_hydro_2_C | 5.0e-6 | 343 | 481 | 146 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
pfam02837 | Glyco_hydro_2_N | 6.0e-7 | 85 | 162 | 79 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
pfam00703 | Glyco_hydro_2 | 8.0e-11 | 210 | 329 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
PRK10340 | ebgA | 4.0e-16 | 99 | 465 | 382 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
COG3250 | LacZ | 3.0e-40 | 44 | 688 | 672 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO27794.1 | 0 | 1 | 974 | 1 | 976 | glycosyl hydrolase [Gossypium hirsutum] |
EMBL | CAN82620.1 | 0 | 1 | 973 | 1 | 972 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002284576.1 | 0 | 1 | 973 | 1 | 972 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319539.1 | 0 | 1 | 973 | 1 | 972 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512381.1 | 0 | 1 | 974 | 1 | 973 | beta-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2vzo_B | 0 | 40 | 790 | 79 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
PDB | 2vzo_A | 0 | 40 | 790 | 79 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
PDB | 2x09_B | 0 | 40 | 790 | 79 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX269571 | 340 | 581 | 920 | 0 |
ES793920 | 368 | 373 | 738 | 0 |
GO871600 | 333 | 301 | 633 | 0 |
ES818807 | 423 | 160 | 558 | 0 |
ES818807 | 134 | 440 | 560 | 0.0001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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