Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_489.8 |
Family | GH3 |
Protein Properties | Length: 778 Molecular Weight: 85088 Isoelectric Point: 6.1321 |
Chromosome | Chromosome/Scaffold: 489 Start: 30013 End: 32899 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 70 | 325 | 0 |
VPRLGLPKYEWWNEALHGVSSVGGGSRFDAVVPGATSFPTVILSTASFNEDLWKRIGQVISNEARAMYNLGRAGLTFWSPVINVVRDPRWGRIQETPGED PFVVGRYAANFVRGLQDVRGTEHVHDLNARPLKVSACCKHYAAYDVDNWKGIDRLHFDARVTEQDMVETFLKPFEMCVKEGDVSSIMCSYNRVNGIPTCA DPKLLNQTVRGDWGLHGYLVSDCDSIEVMVNKHQFINDTNEDAVAQTLKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 778 Download |
MSDKLNDATP EPPLFTYVCD PAHLSAVKLD GSTLGFCDTS LPYSVRVEDL VDRLSVEEKV 60 LLLGSTSPGV PRLGLPKYEW WNEALHGVSS VGGGSRFDAV VPGATSFPTV ILSTASFNED 120 LWKRIGQVIS NEARAMYNLG RAGLTFWSPV INVVRDPRWG RIQETPGEDP FVVGRYAANF 180 VRGLQDVRGT EHVHDLNARP LKVSACCKHY AAYDVDNWKG IDRLHFDARV TEQDMVETFL 240 KPFEMCVKEG DVSSIMCSYN RVNGIPTCAD PKLLNQTVRG DWGLHGYLVS DCDSIEVMVN 300 KHQFINDTNE DAVAQTLKAG LDLDCGDFYP KFTMSSIRQG KVSVEDVDKA LRNLYMLMMR 360 LGYFDGSPQF KNLGKKDICS ASNIELAAEA ARQGIVLLKN DNGTLPFNRD TITNLAVVGP 420 HAKVTDVMIG NYAGDPCRYV TPVDGFSIYT KVQTQQGCED VLCNNDKLIG AAVDAAKVAD 480 ATVIMVGLNL KVEAESLDRL NLFLPGFQTQ LINQVADAAK GPVVLIIMSA GGIDITFAKN 540 NPKIKAIIWA GYPGQEGGQA IADVVFGTYN PGGRLPITWY EGSYVEKLPM TSMQLRPVDN 600 LAYPGRTYKF YNGTTVYPFG YGLSYSQFTY TIQPLNPASL NIKLNKLQHC HDIDYKPGAQ 660 KPTCPSLKIE DGLACDAYYT INTHIQIKNT GTRDGDQVVI VYSKAPEGIL GAPIKQVIGF 720 KRVGIRAGHT AVLPFQFNAC KALSIVDYQA HTVLPAGQHS IIVGDGVASF TYDVNFT* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-55 | 395 | 626 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-55 | 68 | 440 | 380 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 8.0e-65 | 68 | 357 | 294 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-72 | 105 | 772 | 715 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 2 | 765 | 778 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 15 | 776 | 45 | 802 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 5 | 776 | 36 | 803 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 15 | 776 | 49 | 807 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 49 | 776 | 2 | 693 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 2 | 777 | 32 | 802 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 105 | 764 | 91 | 722 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3u48_A | 0 | 105 | 764 | 91 | 722 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3u4a_B | 0 | 105 | 764 | 91 | 722 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3u4a_A | 0 | 105 | 764 | 91 | 722 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 2x41_A | 8.96831e-44 | 46 | 722 | 3 | 658 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BX838810 | 324 | 16 | 339 | 0 |
GW867030 | 317 | 50 | 366 | 0 |
BX837031 | 313 | 16 | 328 | 0 |
DY932965 | 314 | 34 | 347 | 0 |
GW867097 | 326 | 49 | 374 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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