| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_5.133 |
| Family | CE8 |
| Protein Properties | Length: 421 Molecular Weight: 46158.9 Isoelectric Point: 5.7497 |
| Chromosome | Chromosome/Scaffold: 5 Start: 983990 End: 985885 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 104 | 392 | 0 |
| TVGLNGCANFTSVQKAVDVVLDFTPLKTLILIDSGTYREKVTVHATKTNIIFQGQGYSNTAISWNDTANSTGGTTNSASVSIFAPNFTAYNISFENTAPE PDPGEIGGQAVALRIGGDQAAFYGCGFFGAQDTLHDDKGRHYFKECFIQGSIDFIFGNGRSLYEDCTIESIAKEGFGGVSGCITAQARESMSEETGFSFV SCAISGCGQVWLGRAWGAYATVVFSKTYMSSTVSPDGWNDWTDPMRDQTVYFGEYECFGAGADHKHRVSYGKQLLQNEAAPFMDVSYID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 421 Download |
| MRTKTNSSWL FAFAIALLSI ILALYSVLPS SMTNIVVNTT SHNTLDLSVI RSVARQGGME 60 DFLSLLMKIM LRKHHTRMQY KIECDGRKWS SSLMSQYNVS LVLTVGLNGC ANFTSVQKAV 120 DVVLDFTPLK TLILIDSGTY REKVTVHATK TNIIFQGQGY SNTAISWNDT ANSTGGTTNS 180 ASVSIFAPNF TAYNISFENT APEPDPGEIG GQAVALRIGG DQAAFYGCGF FGAQDTLHDD 240 KGRHYFKECF IQGSIDFIFG NGRSLYEDCT IESIAKEGFG GVSGCITAQA RESMSEETGF 300 SFVSCAISGC GQVWLGRAWG AYATVVFSKT YMSSTVSPDG WNDWTDPMRD QTVYFGEYEC 360 FGAGADHKHR VSYGKQLLQN EAAPFMDVSY IDGNQWLLHQ NITLSTSPHH YDQDNVVPNM 420 * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 1.0e-101 | 80 | 397 | 326 | + pectinesterase | ||
| PLN02634 | PLN02634 | 1.0e-106 | 101 | 397 | 304 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 2.0e-107 | 102 | 399 | 299 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 9.0e-128 | 99 | 399 | 308 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 8.0e-147 | 98 | 397 | 303 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30191.1 | 0 | 39 | 398 | 34 | 400 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_181209.1 | 0 | 82 | 402 | 71 | 390 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002264941.1 | 0 | 102 | 398 | 14 | 310 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326223.1 | 0 | 88 | 407 | 3 | 323 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519425.1 | 0 | 42 | 408 | 40 | 378 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 103 | 397 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-37 | 105 | 397 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 5e-18 | 95 | 328 | 29 | 276 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 1e-17 | 127 | 385 | 33 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 1e-17 | 127 | 385 | 33 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
