y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_50.88 |
Family | CBM43 |
Protein Properties | Length: 206 Molecular Weight: 21262.4 Isoelectric Point: 6.4748 |
Chromosome | Chromosome/Scaffold: 50 Start: 844534 End: 845881 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 57 | 139 | 2.1e-33 |
WCIASQTASKTALQVALDYACGYGGADCSAIQPSGSCYNPNTLHHHATYAFNNYYHKNPIPSSCNFGGTAVTTSTDPSTGTCQ |
Full Sequence |
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Protein Sequence Length: 206 Download |
MKISIGQIQK DITTPITTVP TINPTPIINP NSDPDSTTTS PVSMTPMTIP TSSASSWCIA 60 SQTASKTALQ VALDYACGYG GADCSAIQPS GSCYNPNTLH HHATYAFNNY YHKNPIPSSC 120 NFGGTAVTTS TDPSTGTCQY PPTSTSSSIL NTTNSNGSTV YGAVPSNPTP SSSSSSSSSS 180 TILNFNSSFF VIIYLLCVSA QNISS* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-16 | 57 | 127 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-33 | 57 | 140 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC79758.1 | 9.94922e-44 | 2 | 153 | 46 | 205 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
GenBank | EEE64827.1 | 2.99878e-43 | 2 | 153 | 46 | 205 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
RefSeq | NP_001031450.1 | 0 | 32 | 198 | 53 | 216 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 0 | 57 | 162 | 99 | 204 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002441577.1 | 0 | 7 | 153 | 33 | 170 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000002 | 52 | 141 | 8 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CN549719 | 108 | 57 | 164 | 0 |
DT494383 | 108 | 57 | 164 | 0 |
CF236179 | 108 | 57 | 164 | 0 |
BU894548 | 108 | 57 | 164 | 0 |
FC067404 | 106 | 57 | 162 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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