Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_51.146 |
Family | GH3 |
Protein Properties | Length: 630 Molecular Weight: 68966.6 Isoelectric Point: 8.6861 |
Chromosome | Chromosome/Scaffold: 51 Start: 1381492 End: 1384392 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 105 | 340 | 0 |
LSTRLGIPMIYGIDAIHGHNNVYNATIFPHNIGLGAARDPALVKKIGAVTAAEVRATGIPYVFAPCVAVCRDPRWIRCYESYGEDPKIVQDMTEIISGLQ GDIPSSSQKGVPFVDGQKKVAACAKHYVGDGGTNKGINENNTVIDRHGLLTIHMPGYYHSIIKGVSTVMVSFSSWNGVKMHANHDLITNFLKNTLRFRGF VISDWQGIDKIMSPPHSNYSYSIQAAIQAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 630 Download |
MVRTPFFLMA FLVFCCMAMA EAEEYTKYKD PKQPLGVRLN DLLSRMTLEE KIGQMVQIER 60 SVASAQVINE YFIGSVLSGG GSVPAKKANA ETWINMVNEF QKGALSTRLG IPMIYGIDAI 120 HGHNNVYNAT IFPHNIGLGA ARDPALVKKI GAVTAAEVRA TGIPYVFAPC VAVCRDPRWI 180 RCYESYGEDP KIVQDMTEII SGLQGDIPSS SQKGVPFVDG QKKVAACAKH YVGDGGTNKG 240 INENNTVIDR HGLLTIHMPG YYHSIIKGVS TVMVSFSSWN GVKMHANHDL ITNFLKNTLR 300 FRGFVISDWQ GIDKIMSPPH SNYSYSIQAA IQAGIDMVMV PFNYPEFIDG LIFHVKNYNI 360 PISRINDAVK RILRVKFVMG LFENPLANTS LAKEIGSQEH RELAREAVRK SLVLFKNGKS 420 ADHEPMIPLP KKALKILVAG SHAHNLGYQC GAWTIEIRGF SGNNLTTGTT ILTAIKNTVD 480 PATKVVYNEN PDVDFVKSKN FSYAIVVVGE HPYGPIEGNS ENLTIPEPGP TTIKNVCGAV 540 KCVVIIISGR PVVIKPYVST MDALIAAWLP GTEGQGVADA LFGDYGFTGK LPNTWFKTVN 600 QLPMNLGDRH YDPLFPIGHG LTTQPIKPN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 4.0e-29 | 34 | 613 | 639 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-38 | 412 | 622 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 6.0e-68 | 39 | 622 | 661 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 3.0e-81 | 46 | 461 | 423 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-87 | 47 | 375 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAZ15705.1 | 0 | 3 | 627 | 5 | 625 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 1 | 627 | 1 | 624 | unknown [Populus trichocarpa] |
RefSeq | XP_002266470.1 | 0 | 24 | 627 | 24 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 28 | 627 | 3 | 601 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 12 | 627 | 3 | 611 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 24 | 627 | 1 | 603 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
PDB | 1iex_A | 0 | 24 | 627 | 1 | 603 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
PDB | 1iew_A | 0 | 24 | 627 | 1 | 603 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
PDB | 1iev_A | 0 | 24 | 627 | 1 | 603 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
PDB | 1ieq_A | 0 | 24 | 627 | 1 | 603 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 429 | 74 | 502 | 0 |
FN998758 | 328 | 71 | 398 | 0 |
FN998735 | 317 | 71 | 387 | 0 |
FN998511 | 317 | 71 | 387 | 0 |
HO784016 | 51 | 25 | 75 | 0.000000000007 |
Sequence Alignments (This image is cropped. Click for full image.) |
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