CAZyme Information

Basic Information
SpeciesCarica papaya
Cazyme IDevm.model.supercontig_53.158
FamilyGH13
Protein PropertiesLength: 586 Molecular Weight: 65430.1 Isoelectric Point: 6.7225
ChromosomeChromosome/Scaffold: 53 Start: 1284463 End: 1302700
Descriptionlimit dextrinase
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH13463921.1e-31
  IQNEDGYNWGYNPVLWGVPKGSYASNANGPCRVIEFRKMVQAINHLGLRVVLDVVYNHLYESGPFNKDSVLDKVVPGYYLRRNADGLVENSTCMNNTASE
  HYMVERLILDDLIHWAVNYKVDGFRFDLMGHIMKSTMIKANDALHRLTKERDGVDGSSIYIYGEGWDYGEVAKNARGVNASQFNLCGTGIGSFNDRIRDA
  INGGSPFGHPLEQGFATGLYLQPNDHDQDSEATQQLMLAVAKDHIQVGMAANLRDFVLTSHEGKEVKGSEVLTNDGTPVGYTSSPIETINYVSAHDNETL
  FDIASMKTPKKISVEERCRINQLATSMIALSQGIPFFHAGDEILRSK
Full Sequence
Protein Sequence     Length: 586     Download
MSIDKNIMLW PMIRNTRLAT RCFSDASVLE KLPPDSAEQQ AQISAIQNED GYNWGYNPVL    60
WGVPKGSYAS NANGPCRVIE FRKMVQAINH LGLRVVLDVV YNHLYESGPF NKDSVLDKVV    120
PGYYLRRNAD GLVENSTCMN NTASEHYMVE RLILDDLIHW AVNYKVDGFR FDLMGHIMKS    180
TMIKANDALH RLTKERDGVD GSSIYIYGEG WDYGEVAKNA RGVNASQFNL CGTGIGSFND    240
RIRDAINGGS PFGHPLEQGF ATGLYLQPND HDQDSEATQQ LMLAVAKDHI QVGMAANLRD    300
FVLTSHEGKE VKGSEVLTND GTPVGYTSSP IETINYVSAH DNETLFDIAS MKTPKKISVE    360
ERCRINQLAT SMIALSQGIP FFHAGDEILR SKSLDRDSYN SGDWFNRLDF SYDSNNWGVG    420
LPPKEKNEKN WALIKPRLAD PSFKPQKNHI LATLEKFKNV LRIRYSSPLF RLKTANAIQE    480
RVHFHNTGLS EVPGIIVMSI EDGYDGVPGL SQLDPIYSYI VVIFNARPSE VSFCSPTLQG    540
RKLELHPVQV TSTDKIVKMS SYEASSGSFK VPPRTTSVFV EPRKI* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam11852DUF33722.0e-82411583173+
TIGR02104pulA_typeI1.0e-9349533490+
cd11341AmyAc_Pullulanase_LD-like2.0e-14648416372+
PLN02877PLN02877025583559+
TIGR02103pullul_strch011583577+
Gene Ontology
GO TermDescription
GO:0003824catalytic activity
GO:0005975carbohydrate metabolic process
GO:0043169cation binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI31395.1025585396956unnamed protein product [Vitis vinifera]
RefSeqNP_196056.2025583405963ATLDA (LIMIT DEXTRINASE); alpha-amylase/ limit dextrinase/ pullulanase [Arabidopsis thaliana]
RefSeqXP_002271820.1025585347907PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002315334.1021583332893predicted protein [Populus trichocarpa]
RefSeqXP_002532780.1021583403964pullulanase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4aio_A023583323883A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi
PDB2y5e_A023583323883A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi
PDB2y4s_A023583323883A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin
PDB2fhf_A0135835091070A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin
PDB2fhc_A0135835091070A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin
Metabolic Pathways
Pathway NameReactionECProtein Name
starch degradation IRXN-1824EC-3.2.1.41pullulanase
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO8722433412095490
CO128344282233040
EH7738472822405210
JG9325492871384240
DV1354572641984610
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00024.1
Arabidopsis lyrata487216
Arabidopsis thalianaAT5G04360.1
Brachypodium distachyonBradi5g00540.2Bradi5g00540.1
Brassica rapaBra009461
Capsella rubellaCarubv10000153m
Chlamydomonas reinhardtiiCre11.g476650.t1.3
Citrus clementinaCiclev10031035m
Citrus sinensisorange1.1g002079morange1.1g002161morange1.1g002787m
Cucumis sativusCucsa.308730.1
Eucalyptus grandisEucgr.G02746.1Eucgr.G02746.2
Fragaria vescamrna23425.1-v1.0-hybrid
Glycine maxGlyma10g34080.1
Gossypium raimondiiGorai.009G305300.12Gorai.009G305300.11Gorai.009G305300.1Gorai.009G305300.10Gorai.009G305300.2
Gorai.009G305300.3Gorai.009G305300.4Gorai.009G305300.5Gorai.009G305300.6Gorai.009G305300.7
Gorai.009G305300.9Gorai.009G305300.8
Linum usitatissimumLus10038675
Malus domesticaMDP0000142103
Manihot esculentacassava4.1_004771m
Mimulus guttatusmgv1a001246m
Physcomitrella patensPp1s142_79V6.1.481.888
Phaseolus vulgarisPhvul.007G139400.1
Populus trichocarpaPotri.010G229300.4Potri.010G229300.1Potri.010G229300.2Potri.010G229300.3
Prunus persicappa000905m
Ricinus communis29475.m000230
Setaria italicaSi011852m
Selaginella moellendorffii165275
Sorghum bicolorSb06g001540.1
Thellungiella halophilaThhalv10012585m
Vitis viniferaGSVIVT01016183001
Volvox carteriVocar20014607m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny