| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_540.3 |
| Family | GH2 |
| Protein Properties | Length: 931 Molecular Weight: 104645 Isoelectric Point: 5.7424 |
| Chromosome | Chromosome/Scaffold: 540 Start: 10622 End: 27959 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 15 | 796 | 0 |
| SQDSRLPAEFEISDYCYQCDSGKKNVLAVQVYRWSDGTYLEDQDHWWLSGIHRDVLLLAKPQVFVADYFFTSKLAEDYSSADIQVEVKIDNSKEISKDRV LDNFIIEAEIYDTASWYDQEGYMDLLSSKAANIRLNPSPTRLLGFHGYVLSGKLETPRLWSAEQPNLYVLVIILKDASGHIVDCESCLAGIRQVSKATKQ LLVNGQPVIIRGVNRHEHHPRLGKTNIESCLVKDLVIMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDLSGHLKHPTKEPSWAAAMLD RVVGMVERDKNHTCIICWSLGNESSYGPTHSAMAGWIRGKDPSRLVHYEGGGSRTQSTDIVCPMYMRVWDIVKIANDPNEARPLILCEYSHAMGNSSGNI FEYWEAIDSTFGLQGGFIWDWVDQGLLKDNADGSKHWAYGGDFGDTPNDLNFCLNGLLWPDRTPHPALHEVKHVYQPIKVSLRGGTLKITNTNFFETTQG LEFSWAIHGDGYQLGSGILSLPLIKPQGSFDVELDSGPWCSVWTSSTAEECFITITSKLLHSTSWVEHGHTISSTQVQLPAKRERIPHVIKDKGTTISSE TYEDKIKLFSQQNLWEIQFNVQTGALESWKVQGVTVMENGILPCFWRAPTDNDKGGCARSYYSRWKDAHMDKLVFLTESCSIQDKKDELVKIAVVYLGVT KGEDGSFTESERSSVPFKVDMVYTIYGSGDIIMECDVNPSSGLPPLPRVGVEFHIEKSLDQITWYGKGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 931 Download |
| MVRPGAFGWI SRAVSQDSRL PAEFEISDYC YQCDSGKKNV LAVQVYRWSD GTYLEDQDHW 60 WLSGIHRDVL LLAKPQVFVA DYFFTSKLAE DYSSADIQVE VKIDNSKEIS KDRVLDNFII 120 EAEIYDTASW YDQEGYMDLL SSKAANIRLN PSPTRLLGFH GYVLSGKLET PRLWSAEQPN 180 LYVLVIILKD ASGHIVDCES CLAGIRQVSK ATKQLLVNGQ PVIIRGVNRH EHHPRLGKTN 240 IESCLVKDLV IMKQNNINAV RNSHYPQHPR WYELCDLFGM YMIDEANIET HGFDLSGHLK 300 HPTKEPSWAA AMLDRVVGMV ERDKNHTCII CWSLGNESSY GPTHSAMAGW IRGKDPSRLV 360 HYEGGGSRTQ STDIVCPMYM RVWDIVKIAN DPNEARPLIL CEYSHAMGNS SGNIFEYWEA 420 IDSTFGLQGG FIWDWVDQGL LKDNADGSKH WAYGGDFGDT PNDLNFCLNG LLWPDRTPHP 480 ALHEVKHVYQ PIKVSLRGGT LKITNTNFFE TTQGLEFSWA IHGDGYQLGS GILSLPLIKP 540 QGSFDVELDS GPWCSVWTSS TAEECFITIT SKLLHSTSWV EHGHTISSTQ VQLPAKRERI 600 PHVIKDKGTT ISSETYEDKI KLFSQQNLWE IQFNVQTGAL ESWKVQGVTV MENGILPCFW 660 RAPTDNDKGG CARSYYSRWK DAHMDKLVFL TESCSIQDKK DELVKIAVVY LGVTKGEDGS 720 FTESERSSVP FKVDMVYTIY GSGDIIMECD VNPSSGLPPL PRVGVEFHIE KSLDQITWYG 780 KGPFECYPDR KAAAHVGIYE QTVGDMHVPY TVPGECGGRA DVRWVTLRNN DGIGVYASIY 840 RSAPPMQLSA SYYTTAELDR ATHNEELIKG DNIEVHLDHK HMGLGGDDSW TPSVHDKYLI 900 PPVPYSFSMR FSPITGSNSG YDIYKSQVQN * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 4.0e-104 | 629 | 911 | 284 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 2.0e-113 | 213 | 493 | 291 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 2.0e-124 | 9 | 794 | 795 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 15 | 913 | 925 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 15 | 918 | 908 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 2 | 930 | 183 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 2 | 930 | 183 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 15 | 930 | 199 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 10 | 930 | 194 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 15 | 930 | 199 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1f4h_D | 0 | 16 | 909 | 161 | 1016 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
| PDB | 1f4h_C | 0 | 16 | 909 | 161 | 1016 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
| PDB | 1f4h_B | 0 | 16 | 909 | 161 | 1016 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
| PDB | 1f4h_A | 0 | 16 | 909 | 161 | 1016 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
| PDB | 1f4a_D | 0 | 16 | 909 | 161 | 1016 | A Chain A, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained Monomer- Orthorhombic) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX276078 | 330 | 568 | 894 | 0 |
| EX272730 | 362 | 536 | 895 | 0 |
| ES794486 | 371 | 267 | 637 | 0 |
| EL444301 | 300 | 251 | 550 | 0 |
| EY723441 | 287 | 246 | 532 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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