Basic Information | |
---|---|
Species | Carica papaya |
Cazyme ID | evm.model.supercontig_56.120 |
Family | AA1 |
Protein Properties | Length: 546 Molecular Weight: 59524.5 Isoelectric Point: 9.8242 |
Chromosome | Chromosome/Scaffold: 56 Start: 1448533 End: 1450827 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 22 | 531 | 0 |
CRVRHYKFNVVMKNTTRLCSSKPIVTVNGKFPGPTLYAREDDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQSYTYNFTITGQRGT LLWHAHILWLRATVHGAIVILPKRGVPYPFPTPHKEVVLVLAEWWKSDTEAVINEALKSGLAPNVSDAHTMNGHPGPSSNCSSQRGFRLAVESGKTYMLR IINAALNEKLFFKIAGHKLTVVEVDATYVKPFKIDTITVAPGQTTNVLVTADKTAGKYLVAASPFMDAPIAVYNITATATLHYSGTLANSPTTLTATPPQ TPPVSTPNLPALVPKTVDHNLLFTVGLGINPCPTCKAGNGSRVVASMNNVTFVMPTVALLQARFFNISGVFTTDFPAKPAHGFNFTGSGPANLATSRGTK VFRLAYNSTVQLVLQDTGIVTPENHPIHLHGFNFFAVGTGQGNFDASKDPKNFNLADPVERNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKM AFLVDNGKGP |
Full Sequence |
---|
Protein Sequence Length: 546 Download |
MEYSSFRFLI FLTCLFPAFV HCRVRHYKFN VVMKNTTRLC SSKPIVTVNG KFPGPTLYAR 60 EDDTVLVKVV NHVKYNVSIH WHGIRQLRTG WADGPAYITQ CPIQPGQSYT YNFTITGQRG 120 TLLWHAHILW LRATVHGAIV ILPKRGVPYP FPTPHKEVVL VLAEWWKSDT EAVINEALKS 180 GLAPNVSDAH TMNGHPGPSS NCSSQRGFRL AVESGKTYML RIINAALNEK LFFKIAGHKL 240 TVVEVDATYV KPFKIDTITV APGQTTNVLV TADKTAGKYL VAASPFMDAP IAVYNITATA 300 TLHYSGTLAN SPTTLTATPP QTPPVSTPNL PALVPKTVDH NLLFTVGLGI NPCPTCKAGN 360 GSRVVASMNN VTFVMPTVAL LQARFFNISG VFTTDFPAKP AHGFNFTGSG PANLATSRGT 420 KVFRLAYNST VQLVLQDTGI VTPENHPIHL HGFNFFAVGT GQGNFDASKD PKNFNLADPV 480 ERNTIGVPSG GWTAIRFRAD NPGVWFMHCH LEVHTTWGLK MAFLVDNGKG PNQSLLPPPS 540 DLPKC* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-52 | 30 | 146 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02835 | PLN02835 | 1.0e-52 | 25 | 507 | 512 | + oxidoreductase | ||
PLN02604 | PLN02604 | 4.0e-91 | 5 | 523 | 557 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-94 | 24 | 523 | 551 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 22 | 545 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC49536.1 | 0 | 8 | 545 | 8 | 557 | diphenol oxidase [Nicotiana tabacum] |
RefSeq | XP_002308209.1 | 0 | 8 | 545 | 1 | 550 | laccase 1d [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 1 | 545 | 1 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002322962.1 | 0 | 1 | 545 | 1 | 557 | laccase 1b [Populus trichocarpa] |
RefSeq | XP_002533894.1 | 0 | 4 | 545 | 3 | 556 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 23 | 523 | 2 | 521 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1asq_A | 0 | 23 | 523 | 2 | 521 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1asp_B | 0 | 23 | 523 | 2 | 521 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO797675 | 495 | 68 | 546 | 0 |
DY284570 | 303 | 4 | 306 | 0 |
DW494893 | 288 | 24 | 311 | 0 |
DY294712 | 401 | 108 | 491 | 0 |
DY294712 | 69 | 434 | 498 | 8 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|