| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_59.133 |
| Family | CE8 |
| Protein Properties | Length: 328 Molecular Weight: 36819 Isoelectric Point: 9.6168 |
| Chromosome | Chromosome/Scaffold: 59 Start: 1241775 End: 1243928 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 31 | 317 | 0 |
| RVDQKGHGDFTTIQAAIDSVPSNNKKWVIILVKTGTYREKVKIPYDKPYVVMKGQGRKRTIVAWDDHQSIAQSPTFTSMADNIVVKSIHFMNSYNNPGGT NKNPRVPAVAALIAGDKSAFYRCKFSGVQDTLWDEQGRHYFYRCTIQGAVDFIFGSAQSIYESCVINTNGNALGPGVSGFITAQGRTNPNDQTGFVFKYC VITGTGNNFLGRPWRQYARVIFYKSDLTSVIDPRGWDAWHFAGHEGQVTFAENGCFGSGSDTSRRVRWEKKLNPQTVQQLTRISYID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 328 Download |
| MRVLVEYCIC ILCIIQLVIL NIGVEGQRVI RVDQKGHGDF TTIQAAIDSV PSNNKKWVII 60 LVKTGTYREK VKIPYDKPYV VMKGQGRKRT IVAWDDHQSI AQSPTFTSMA DNIVVKSIHF 120 MNSYNNPGGT NKNPRVPAVA ALIAGDKSAF YRCKFSGVQD TLWDEQGRHY FYRCTIQGAV 180 DFIFGSAQSI YESCVINTNG NALGPGVSGF ITAQGRTNPN DQTGFVFKYC VITGTGNNFL 240 GRPWRQYARV IFYKSDLTSV IDPRGWDAWH FAGHEGQVTF AENGCFGSGS DTSRRVRWEK 300 KLNPQTVQQL TRISYIDKEG WLKRQPY* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02480 | PLN02480 | 1.0e-84 | 28 | 322 | 296 | + Probable pectinesterase | ||
| PLN02665 | PLN02665 | 2.0e-85 | 28 | 322 | 301 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 4.0e-92 | 29 | 323 | 295 | + putative pectinesterase | ||
| PLN02176 | PLN02176 | 9.0e-110 | 28 | 326 | 300 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 0 | 27 | 326 | 300 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01354.1 | 0 | 9 | 326 | 13 | 328 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| EMBL | CBI40838.1 | 0 | 12 | 326 | 21 | 341 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189055.1 | 0 | 8 | 326 | 12 | 332 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002263748.1 | 0 | 8 | 326 | 10 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002518106.1 | 0 | 1 | 326 | 1 | 335 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 30 | 327 | 9 | 313 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-38 | 32 | 323 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 3e-20 | 12 | 245 | 15 | 270 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 0.000000000000004 | 40 | 244 | 18 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.000000000000004 | 40 | 244 | 18 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
