y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_59.40 |
Family | GH14 |
Protein Properties | Length: 575 Molecular Weight: 63471.7 Isoelectric Point: 6.3105 |
Chromosome | Chromosome/Scaffold: 59 Start: 434391 End: 437235 |
Description | beta-amylase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 109 | 530 | 0 |
YVMMPLDSVTMGNTVNRRKAMNVSLQALKSAGVEGIMMDVWWGLVEREAPGVYNWGGYTELLEMAKKHGLKVQAVMSFHQCGGNVGDSCNIPLPKWVVEE MEKDPDLAYTDQWGRRNYEYVSLGCDTLPVLKGRTPVQCYADFMRAFRDNFKHLLGETIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKFLL ASLKAAAEAAGKPEWGSTGPTDAGHYNNWPEDTPFFRKEGGGWNSPYGEFFLSWYSQMLLDHGERILTSAKSIFENTGIKISVKVAGIHWHYGSRSHAPE LTAGYYNTRFRDGYLPIAQMLARHGAVFNFTCIEMRDHEQPQDALCAPEKLVRQVAVATQAAQVPLAGENALPRYDESAHEQILQASSLNFDGNSETDRE MSAFTYLRMNPELFQPDNWRRF |
Full Sequence |
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Protein Sequence Length: 575 Download |
MALNIAHQIT SLAGIPIPSD LTATATDSSS TVSTSAVWRP AAASIRCKIE SPEASGSVTP 60 PLSPPATRPD LSAAFRAITS ATTDGEGQRT YREGGAPREG KNGGGVPVYV MMPLDSVTMG 120 NTVNRRKAMN VSLQALKSAG VEGIMMDVWW GLVEREAPGV YNWGGYTELL EMAKKHGLKV 180 QAVMSFHQCG GNVGDSCNIP LPKWVVEEME KDPDLAYTDQ WGRRNYEYVS LGCDTLPVLK 240 GRTPVQCYAD FMRAFRDNFK HLLGETIVEI QVGMGPAGEL RYPSYPEQNG TWKFPGIGAF 300 QCYDKFLLAS LKAAAEAAGK PEWGSTGPTD AGHYNNWPED TPFFRKEGGG WNSPYGEFFL 360 SWYSQMLLDH GERILTSAKS IFENTGIKIS VKVAGIHWHY GSRSHAPELT AGYYNTRFRD 420 GYLPIAQMLA RHGAVFNFTC IEMRDHEQPQ DALCAPEKLV RQVAVATQAA QVPLAGENAL 480 PRYDESAHEQ ILQASSLNFD GNSETDREMS AFTYLRMNPE LFQPDNWRRF VAFVKKMKEG 540 KDTHKCREQV EREAEHFVHV TQPLVQEAAV ALTH* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 3.0e-132 | 106 | 537 | 436 | + beta-amylase | ||
PLN02161 | PLN02161 | 4.0e-135 | 106 | 537 | 442 | + beta-amylase | ||
PLN02801 | PLN02801 | 1.0e-174 | 106 | 542 | 439 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 574 | 582 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 53 | 540 | 497 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY89374.1 | 0 | 1 | 574 | 1 | 576 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
EMBL | CAN71375.1 | 0 | 3 | 574 | 1 | 570 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_189034.1 | 0 | 1 | 574 | 1 | 575 | BAM1 (BETA-AMYLASE 1); beta-amylase [Arabidopsis thaliana] |
RefSeq | XP_002285569.1 | 0 | 2 | 574 | 3 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002518196.1 | 0 | 1 | 574 | 1 | 574 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 106 | 542 | 12 | 446 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1q6c_A | 0 | 106 | 542 | 12 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 106 | 542 | 12 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 106 | 542 | 12 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 106 | 542 | 12 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779314 | 409 | 164 | 572 | 0 |
HO798206 | 347 | 226 | 572 | 0 |
HO826564 | 407 | 162 | 568 | 0 |
EG518392 | 307 | 120 | 426 | 0 |
DT555349 | 321 | 193 | 513 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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