| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_64.120 |
| Family | GH35 |
| Protein Properties | Length: 856 Molecular Weight: 96407.1 Isoelectric Point: 9.4707 |
| Chromosome | Chromosome/Scaffold: 64 Start: 825260 End: 832377 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 70 | 374 | 0 |
| LVIDGQHKILFSGSIHYPRSTPQMWPSLIAKAREGGLDVIETLVFWNLHEPKPGQFDFSGRRDLVRFIKEIQAQGLYACVRIGPFIQGEWGYGGLPIWLH DVPGIVFRSDNEPFKNHMQQYAKIIVNLLKSERLFASQGGPIILSQIENEYGMVQKAFGEKGKAYLQWTAKLAVELDTGVPWVMCKQDDAPDPVINACNG RRCGETFAGPNSPNKPAIWTENWTTSYEVYGKEPRLRSAEDIAFHVVLFIAKKGSYVNYYMYHGGTNFGRTGSEYVLTSYYDKAPLDEYGLLRQPKWGHL KELHA | |||
| Full Sequence |
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| Protein Sequence Length: 856 Download |
| MPFRVRFTDI SILFPQFCSS ARSNTERIRE GVKKKKKKMV RSLLFLSVLI AASMMEKCGG 60 VNVSYDGRSL VIDGQHKILF SGSIHYPRST PQMWPSLIAK AREGGLDVIE TLVFWNLHEP 120 KPGQFDFSGR RDLVRFIKEI QAQGLYACVR IGPFIQGEWG YGGLPIWLHD VPGIVFRSDN 180 EPFKNHMQQY AKIIVNLLKS ERLFASQGGP IILSQIENEY GMVQKAFGEK GKAYLQWTAK 240 LAVELDTGVP WVMCKQDDAP DPVINACNGR RCGETFAGPN SPNKPAIWTE NWTTSYEVYG 300 KEPRLRSAED IAFHVVLFIA KKGSYVNYYM YHGGTNFGRT GSEYVLTSYY DKAPLDEYGL 360 LRQPKWGHLK ELHAAIKLCS RPLLSGVQMK MSLGDQQEAF VFRENSQVCA AFLVNNDIRR 420 NVTVQFQNIS YELPPKSISI LPDCKIVAFN TAKVTTQYTT RSMQPSKRFD SIEIWEEYKE 480 SIPTFDETSL RANTILEQMN TTKDTSDYLW YTFRYEHQSS KTKSVLRVEH LGHVLHAFVN 540 GQFAGSGHGS FDQKRFIMEN TISLNNGTNY VSLLSVTVGL PDSGPHLERR AAGLRSLRIQ 600 RTKGYLDDFQ DYPWGYQVGL VGEKLKIYTE NGARKIQWSK HNNSTHQPLT WYKTFFYAPP 660 GRDPVALDLG SMGKGEAWIN GESIGRYWVS ILTRGSPSQT WYNIPRSFLK TTGNLLVIFE 720 EEKGNPAEIS VDTVSITKVC GQVSKSHPPP VISWRGQQQD EPVEKTRHHG RRPKVNLRCP 780 PGRNISKILF ASFGTPSGDC QNYSVGACHS SHSLPVAKRA CVGKNKCSIP LRNDRFGGDP 840 CPGISKSLLV DALCT* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-6 | 85 | 221 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 3.0e-21 | 777 | 854 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 2.0e-21 | 63 | 221 | 169 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-150 | 69 | 376 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 43 | 855 | 844 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18990.1 | 0 | 48 | 855 | 14 | 817 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI18991.1 | 0 | 64 | 854 | 33 | 820 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_177866.2 | 0 | 43 | 855 | 11 | 815 | BGAL16 (beta-galactosidase 16); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002284529.1 | 0 | 64 | 854 | 25 | 812 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 59 | 855 | 4 | 798 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-34 | 69 | 372 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0004 | 633 | 728 | 493 | 580 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-30 | 63 | 363 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1e-30 | 63 | 363 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 724 | 43 | 736 | 0 |
| HO780602 | 594 | 113 | 696 | 0 |
| HO795552 | 529 | 153 | 671 | 0 |
| HO795552 | 75 | 40 | 114 | 0 |
| HO780602 | 27 | 695 | 721 | 0.21 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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