| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_64.121 |
| Family | GH35 |
| Protein Properties | Length: 809 Molecular Weight: 91011.7 Isoelectric Point: 8.5932 |
| Chromosome | Chromosome/Scaffold: 64 Start: 834195 End: 848476 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 28 | 332 | 0 |
| LIINGEHKILFSGSIHYPRSTPQMWPSLIAKAKEGGLDVIQTYVFWNLHEPQQGQFDFSGRNDIIRFIKEIQAQGLYACLRIGPFIEAEWTYGGLPFWLH DVQGIAFRTDNKLFKYHMQRFTTKIVRMMQSEKLYASQGGPVILSQIENEYKNIEPAYHEERPRYIRWAAAMAVGLHTGVPWVMCKQDDAPDPVINACNG LRCGETFAGPNKPNKPWIWTENWTSFYQAYGEEPYMRSAADIAFHVALFIAKKGSYINYYMYHGGTNFGRRAAAYMVTSYYDQAPLDEYGLIRQPKWGHL KELHA | |||
| Full Sequence |
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| Protein Sequence Length: 809 Download |
| MEMVVWVVWV LFLGVAQASN VTYDGRSLII NGEHKILFSG SIHYPRSTPQ MWPSLIAKAK 60 EGGLDVIQTY VFWNLHEPQQ GQFDFSGRND IIRFIKEIQA QGLYACLRIG PFIEAEWTYG 120 GLPFWLHDVQ GIAFRTDNKL FKYHMQRFTT KIVRMMQSEK LYASQGGPVI LSQIENEYKN 180 IEPAYHEERP RYIRWAAAMA VGLHTGVPWV MCKQDDAPDP VINACNGLRC GETFAGPNKP 240 NKPWIWTENW TSFYQAYGEE PYMRSAADIA FHVALFIAKK GSYINYYMYH GGTNFGRRAA 300 AYMVTSYYDQ APLDEYGLIR QPKWGHLKEL HAAVKLCSNS LLSGVQSIVP LGQLQEAYVF 360 KRNSGECSAF LINNDGTRVA KVMFQNHLYE LPQKSISILP DCKIIAFNTA KVTAQTSTRS 420 MILSEKFDTI IRWEVYKEPV PDFGRTSLRA NTLLEHMSTT KDTLDYLWCT FRYNHSSDAE 480 TSLLNVQSNG HVVHAFVNNA FIGTAHGSHK ESGFTLEKTV HFNKGTNDVA LLSVMVGLPD 540 SGAHLERKAA GLHTVRVQDK DCTRQSWGYQ VGLLGEKLQI YTEQGLKNVK WSRFGSSVQR 600 RLTWYKTVFN APAGNDPVAL NLGSMKKGEA WVNGQSIGRY WISFRTPNMN PSQKWYNVPR 660 SFLRPTNNLV VLLEEEDGYP TGITIDTVSI TKVCGHVTDS HLPPVTSGVT QNQRGKGDKK 720 NPGRLPTVHL QCPPERNISK ILFASFGTPS GDCESYSIGS CHSSRSRTII EAACTRIRRC 780 SIPQSEEYFG EDPCPGITKA LLVDAQCT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-5 | 43 | 178 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 4.0e-17 | 730 | 807 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 4.0e-24 | 21 | 324 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-150 | 27 | 334 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 19 | 808 | 825 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18990.1 | 0 | 6 | 808 | 9 | 817 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI18991.1 | 0 | 22 | 807 | 33 | 820 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284529.1 | 0 | 22 | 807 | 25 | 812 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 18 | 808 | 5 | 798 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 20 | 808 | 1 | 764 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-39 | 27 | 330 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.003 | 596 | 674 | 502 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 5e-30 | 21 | 317 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 5e-30 | 21 | 317 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 5e-30 | 21 | 317 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 706 | 20 | 690 | 0 |
| HO780602 | 590 | 71 | 644 | 0 |
| HO795552 | 530 | 111 | 624 | 0 |
| HO795552 | 63 | 11 | 72 | 0 |
| HO795552 | 40 | 72 | 111 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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