y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_8.283 |
Family | CE8 |
Protein Properties | Length: 345 Molecular Weight: 37636.4 Isoelectric Point: 7.0301 |
Chromosome | Chromosome/Scaffold: 8 Start: 2017998 End: 2019298 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 79 | 332 | 0 |
CVDAKGCCNFTTVQSAVDAVANFSMKMTVVWINSGIYYEKVVIPRTKPNVTFQGQGYTTTAIAWNNTANSANGTFYSGSVQVFANNFIAKNISFMNVAPI PSPGDVGAQAVAIRIAGDQAAFWGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNARSFYESCMLVSMANPVPPGTKGINGAVTAHGRASNDDNTGF AFVNCSLGGAGRVWLGRAWRPFSRVVFAKSTMTDIIAPEGWNDFNDPSRDQYVL |
Full Sequence |
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Protein Sequence Length: 345 Download |
MATLPATTSL TTLVAILAIL APTFLFNPFL DYFENLGEML ARYHHHRKHD SGKGKPISVC 60 DDFPIDIPPP DTNATTFLCV DAKGCCNFTT VQSAVDAVAN FSMKMTVVWI NSGIYYEKVV 120 IPRTKPNVTF QGQGYTTTAI AWNNTANSAN GTFYSGSVQV FANNFIAKNI SFMNVAPIPS 180 PGDVGAQAVA IRIAGDQAAF WGCGFFGAQD TLHDDRGRHY FKDCYIQGSI DFIFGNARSF 240 YESCMLVSMA NPVPPGTKGI NGAVTAHGRA SNDDNTGFAF VNCSLGGAGR VWLGRAWRPF 300 SRVVFAKSTM TDIIAPEGWN DFNDPSRDQY VLINYYRHAN DHHN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 9.0e-70 | 80 | 337 | 258 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-79 | 80 | 337 | 259 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 2.0e-81 | 77 | 326 | 256 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 7.0e-90 | 87 | 337 | 257 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 0 | 22 | 336 | 315 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08648.1 | 0 | 4 | 336 | 3 | 348 | Pectinesterase [Medicago truncatula] |
EMBL | CAN73254.1 | 0 | 16 | 329 | 36 | 347 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_172023.1 | 0 | 51 | 336 | 64 | 349 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002323171.1 | 0 | 48 | 336 | 49 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521065.1 | 0 | 53 | 336 | 69 | 352 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-39 | 78 | 319 | 9 | 249 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-29 | 79 | 323 | 6 | 249 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 4e-16 | 107 | 323 | 62 | 307 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.000000000000001 | 74 | 248 | 1 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000000001 | 74 | 248 | 1 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |