| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_82.68 |
| Family | CE8 |
| Protein Properties | Length: 304 Molecular Weight: 34125 Isoelectric Point: 7.5531 |
| Chromosome | Chromosome/Scaffold: 82 Start: 1175557 End: 1176758 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 42 | 293 | 0 |
| RVVVWIGGGTYWEMITIDRSKKFITFYGDLENMPTIVFNGTLYNATMVVESDYFMAVNIAFVNSAPMLDEKRVGAQTVAMRISGDMAAFYNCNFLGFQDT LCDDKDKHFFKDCYIRGTYDFIFGTGRSIYLNSILHSVAIGMGVVTAQARESEEDESGFIFLHCKIKGRGDILLGRAWKSRSRVIFAHSDMASLVNPLGW STGHHPEREKTMYYGEYNYSGRGAKTSGRVGFAKMLSDEEAKPFLGTTFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 304 Download |
| MQCDNGSKKP TIDSRVTFSY PAFPSAHDFH GCYLSLTFFV HRVVVWIGGG TYWEMITIDR 60 SKKFITFYGD LENMPTIVFN GTLYNATMVV ESDYFMAVNI AFVNSAPMLD EKRVGAQTVA 120 MRISGDMAAF YNCNFLGFQD TLCDDKDKHF FKDCYIRGTY DFIFGTGRSI YLNSILHSVA 180 IGMGVVTAQA RESEEDESGF IFLHCKIKGR GDILLGRAWK SRSRVIFAHS DMASLVNPLG 240 WSTGHHPERE KTMYYGEYNY SGRGAKTSGR VGFAKMLSDE EAKPFLGTTF IQGSQWILPP 300 PKL* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 3.0e-66 | 42 | 297 | 259 | + putative pectinesterase | ||
| PLN02671 | PLN02671 | 1.0e-73 | 41 | 297 | 272 | + pectinesterase | ||
| PLN02304 | PLN02304 | 8.0e-78 | 42 | 299 | 273 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-83 | 42 | 299 | 271 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 1.0e-148 | 41 | 303 | 271 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78808.1 | 0 | 41 | 303 | 70 | 341 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI27759.1 | 0 | 40 | 301 | 121 | 388 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277518.1 | 0 | 40 | 301 | 109 | 376 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326144.1 | 0 | 41 | 303 | 105 | 374 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516214.1 | 0 | 41 | 303 | 109 | 378 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 9.99967e-42 | 42 | 297 | 36 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 8e-33 | 26 | 297 | 8 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.00000005 | 76 | 219 | 90 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.00000005 | 76 | 219 | 90 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.00000005 | 76 | 219 | 90 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CV051695 | 199 | 106 | 304 | 0 |
| EV535265 | 245 | 50 | 286 | 0 |
| DY300051 | 235 | 42 | 268 | 0 |
| DY300112 | 229 | 42 | 262 | 0 |
| GR184126 | 260 | 50 | 300 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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