y
Basic Information | |
---|---|
Species | Carica papaya |
Cazyme ID | evm.model.supercontig_82.70 |
Family | CE8 |
Protein Properties | Length: 364 Molecular Weight: 39957.7 Isoelectric Point: 9.4985 |
Chromosome | Chromosome/Scaffold: 82 Start: 1195465 End: 1196852 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 70 | 353 | 0 |
RVAKDGTGDFSTVTDAVKSIPSGNTRSVVVWIGGGTYWEKITIDRSKKFITFYGDPENMPTIVFNGTAAQYGTLYSATVAVESDYFMAVNIDFVNSAPMP DGKRKGAQAVAMRISGDMAAFYNCSFLGFQDTLCDDRGRHLFKDCYIRGTYDFIFGNGRSVYLNSILHSVAIGMGVVTAQARESEEDESGFIFLHCKIKG RGDILLGRAWKSRSRVIFAHSDMASLVNPLGWSTGHHPEREKTVYYGEYKCSGRGAKTSGRVGFAKMLSDEEAKPFLGTTFIQG |
Full Sequence |
---|
Protein Sequence Length: 364 Download |
MAPKNQLSIL ASLSATLLFL QLMISTAAIS LSHSSFIGRI PRNTRRVHSN YRLLEDTMKP 60 VAGDIKSVIR VAKDGTGDFS TVTDAVKSIP SGNTRSVVVW IGGGTYWEKI TIDRSKKFIT 120 FYGDPENMPT IVFNGTAAQY GTLYSATVAV ESDYFMAVNI DFVNSAPMPD GKRKGAQAVA 180 MRISGDMAAF YNCSFLGFQD TLCDDRGRHL FKDCYIRGTY DFIFGNGRSV YLNSILHSVA 240 IGMGVVTAQA RESEEDESGF IFLHCKIKGR GDILLGRAWK SRSRVIFAHS DMASLVNPLG 300 WSTGHHPERE KTVYYGEYKC SGRGAKTSGR VGFAKMLSDE EAKPFLGTTF IQGSQWILPP 360 PKL* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 2.0e-89 | 68 | 357 | 290 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 7.0e-91 | 68 | 357 | 301 | + pectinesterase | ||
PLN02304 | PLN02304 | 2.0e-102 | 60 | 359 | 309 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-110 | 48 | 359 | 320 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 68 | 363 | 298 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27759.1 | 0 | 10 | 361 | 22 | 388 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277202.1 | 0 | 45 | 363 | 43 | 366 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002277518.1 | 0 | 10 | 361 | 10 | 376 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326144.1 | 0 | 52 | 363 | 62 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516214.1 | 0 | 43 | 363 | 52 | 378 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 69 | 357 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3.00004e-41 | 71 | 357 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 7e-18 | 79 | 345 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-18 | 79 | 345 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 7e-18 | 79 | 345 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |