Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_83.1 |
Family | CBM43 |
Protein Properties | Length: 192 Molecular Weight: 20075.7 Isoelectric Point: 4.4978 |
Chromosome | Chromosome/Scaffold: 83 Start: 2114 End: 3675 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 25 | 106 | 8.8e-34 |
WCVARSDASNQALQTALDYACSAGADCTPILSDGLCYLPNTIQAHASYAFNSYFQRKAMAPGSCDFAGAANIAKTDPSYGSC |
Full Sequence |
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Protein Sequence Length: 192 Download |
MAAPLLKLPF FFFFFILNVA EASNWCVARS DASNQALQTA LDYACSAGAD CTPILSDGLC 60 YLPNTIQAHA SYAFNSYFQR KAMAPGSCDF AGAANIAKTD PSYGSCVYPS SLSTAGGLPT 120 TTSSTPTSTN NPNVPTMPTT VTPLDGNAGN GFNPGMMAPP IPTTDNSQAS SNFLVKTSLM 180 PLFIFLLSFT F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-21 | 25 | 94 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-38 | 25 | 108 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU17645.1 | 0 | 1 | 188 | 1 | 191 | unknown [Glycine max] |
RefSeq | NP_001148424.1 | 8.40779e-45 | 7 | 191 | 6 | 183 | glucan endo-1,3-beta-glucosidase 4 [Zea mays] |
RefSeq | NP_193096.5 | 0 | 22 | 154 | 58 | 196 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 0 | 22 | 191 | 47 | 214 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002518089.1 | 0 | 8 | 112 | 5 | 114 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-21 | 22 | 110 | 10 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX288637 | 192 | 1 | 192 | 0 |
CF837054 | 152 | 23 | 174 | 0 |
BQ407488 | 173 | 19 | 189 | 0 |
EX263211 | 146 | 1 | 112 | 0 |
CB289296 | 170 | 23 | 191 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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