| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_860.2 |
| Family | CE8 |
| Protein Properties | Length: 327 Molecular Weight: 35622.8 Isoelectric Point: 9.2109 |
| Chromosome | Chromosome/Scaffold: 860 Start: 16682 End: 19004 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 28 | 320 | 0 |
| ITVAKNPSAGDFTKIQDAIDSLPFINLVRVVIKVKPGVYTEKVNIPPLKSFITIEGAGADKTIIQWGDTAQTPGARGQPMGTYNSATFAVNSLYFIAKNI TFKNTTPVPAPGAVGKQAVAFRISGDTATLLGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFVFGNGLSLFEGCHVHAIAQNAGALTAQGRSSILEDTGF SFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIILPKGWYNWGDPSREMTVFYGQYKCTGPGASFAGRVSWCRELTDEEAKPFISLSFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 327 Download |
| MKWVKFVGSL KHSLFKAAKN KLFPSYTITV AKNPSAGDFT KIQDAIDSLP FINLVRVVIK 60 VKPGVYTEKV NIPPLKSFIT IEGAGADKTI IQWGDTAQTP GARGQPMGTY NSATFAVNSL 120 YFIAKNITFK NTTPVPAPGA VGKQAVAFRI SGDTATLLGC KFLGAQDTLY DHLGRHYYKD 180 CYIEGSVDFV FGNGLSLFEG CHVHAIAQNA GALTAQGRSS ILEDTGFSFV NCKVTGSGAL 240 YLGRAWGPFS RVVFAYTYMD NIILPKGWYN WGDPSREMTV FYGQYKCTGP GASFAGRVSW 300 CRELTDEEAK PFISLSFIDG SEWIKL* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 2.0e-114 | 38 | 325 | 296 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 6.0e-118 | 37 | 325 | 289 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 7.0e-121 | 27 | 324 | 300 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 3.0e-121 | 28 | 324 | 298 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 0 | 1 | 326 | 326 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN63186.1 | 0 | 1 | 326 | 54 | 379 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI27989.1 | 0 | 14 | 326 | 1 | 313 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197474.1 | 0 | 1 | 326 | 58 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330522.1 | 0 | 1 | 326 | 56 | 381 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514210.1 | 0 | 1 | 326 | 58 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 36 | 325 | 16 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1.96182e-44 | 30 | 325 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 3e-27 | 26 | 312 | 31 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 2e-21 | 25 | 312 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 2e-21 | 25 | 312 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT759916 | 273 | 55 | 327 | 0 |
| DT748463 | 246 | 82 | 327 | 0 |
| EE105585 | 249 | 43 | 291 | 0 |
| EH701256 | 260 | 44 | 303 | 0 |
| ES913245 | 272 | 1 | 272 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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