Basic Information | |
---|---|
Species | Carica papaya |
Cazyme ID | evm.model.supercontig_92.12 |
Family | GT47 |
Protein Properties | Length: 729 Molecular Weight: 83479.4 Isoelectric Point: 6.6373 |
Chromosome | Chromosome/Scaffold: 92 Start: 147818 End: 154995 |
Description | exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 281 | 634 | 0 |
KRRPLIYVYDLPPEFNSLLLEGRHFRFECVNRIYDGRNATLWTDQLYGSQMALYESILASSYRTLNAEEADFFFVPVLDACIITRADDAPHLSMQEHQGL RSSLTLEFYKKAYDHIVMQYPYWNHSLGRDHIWSFSWDEGACSAPKEIWSSMMLVHWGNTNSKHNHSTTAYWADSWDDISSDRRGNHPCFDPAKDLVLPA WKLPDANVLSAKLWARSREQRKTLFYFNGNLGPAYNNGRPEASYSMGIRQKVAEEFGSSPNKEGKLGRQHADDVIVTPLRSQNYHMDLASSIFCGVFPGD GWSGRMEDSVLQGCIPVIVQDGIFLPYENVLNYKSFAVRILEADIPNLINILRG |
Full Sequence |
---|
Protein Sequence Length: 729 Download |
MEAFMVYCSH RCFYHNARFV IHRNASWKAE IGQWLSACDE FTKETDIIEP IGGRNCMYDC 60 SGQGVCNHDL GQCRCFHGFR GEGCSERLHL SCNNQNTSEL PYGRWVVSIC SAYCDTTRAM 120 CFCGEGTKYP NRPVAEACGF QANLPSEPGG PILTDWAKAD LDNIFTTNGS KPGWCNVDPA 180 EAYAFRVKFK EQCNCKYDCL WGRFCEIPVQ CTCINQCSGH GHCRGGFCQC DKGWYGTDCS 240 IPSVISTIKE WPQWLRPARI NVPSDTDLTA NLGSFSAMVK KRRPLIYVYD LPPEFNSLLL 300 EGRHFRFECV NRIYDGRNAT LWTDQLYGSQ MALYESILAS SYRTLNAEEA DFFFVPVLDA 360 CIITRADDAP HLSMQEHQGL RSSLTLEFYK KAYDHIVMQY PYWNHSLGRD HIWSFSWDEG 420 ACSAPKEIWS SMMLVHWGNT NSKHNHSTTA YWADSWDDIS SDRRGNHPCF DPAKDLVLPA 480 WKLPDANVLS AKLWARSREQ RKTLFYFNGN LGPAYNNGRP EASYSMGIRQ KVAEEFGSSP 540 NKEGKLGRQH ADDVIVTPLR SQNYHMDLAS SIFCGVFPGD GWSGRMEDSV LQGCIPVIVQ 600 DGIFLPYENV LNYKSFAVRI LEADIPNLIN ILRGFNETEI EFKLRNLQKI WQRFLYRDSI 660 LLEAERQKTA FGRVEDWAAK LLELSEDDVF ATFIQVLHYK LHNDPWRRQF DRRKKEYGLP 720 EECLRRTS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07974 | EGF_2 | 0.0005 | 211 | 239 | 31 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
pfam03016 | Exostosin | 6.0e-60 | 280 | 635 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29877.1 | 0 | 10 | 727 | 104 | 821 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191322.3 | 0 | 20 | 728 | 85 | 793 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002277596.1 | 0 | 10 | 727 | 76 | 793 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308967.1 | 0 | 18 | 728 | 84 | 793 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526728.1 | 0 | 6 | 725 | 21 | 726 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EY104701 | 255 | 368 | 622 | 0 |
HO782792 | 317 | 424 | 729 | 0 |
EH756685 | 261 | 336 | 596 | 0 |
GO884759 | 304 | 274 | 577 | 0 |
HO651219 | 436 | 263 | 696 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|