| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | g11872.t1 |
| Family | GH2 |
| Protein Properties | Length: 1938 Molecular Weight: 196547 Isoelectric Point: 4.9044 |
| Chromosome | Chromosome/Scaffold: 11 Start: 2959945 End: 2973986 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 919 | 1433 | 7.00005e-41 |
| RRVGFRTVELVTEPLSGRLSRSGELWDRLQQGEGVQQGEEGKEGNGGKGEQQQQEPKGGDTSDGGGGGGGGGGGGGGWGGGGGARARASTFPDPPDESFF LRVNGRPLFVRGANLIPLALLHTDAAAAGPRALARLAAAALGAGMNMLRVWGGGRYALDALYDMADGAGLLLWQEFMFACNPYPNTRDFNEEVRLEAEEQ VRRLAGHPSVALWGGNNEVEASLSWYPETAANPRLFAADFTQLFVATLKEGVVDRLDPGRPYLDSSPSSGLHTTSVTTAAATRGASGPSSGPPTPHVKRW GDPQDPRAGDIHYYNYRDDCLDPATYPRARFISEYGTQSFASAAAVRPYGNATVGDWAPTSAFMRHRQRHPNGEWELLASLALHFRQPPSGWTAAPPTAF KLFEPWIYQLQVQQALCYSTALGVWRSGRSDPQAATMGVLYWQLNDVWPGYSWSSLDYGGGRKPLHSAVRRLFRPVTVVAFGREGGNVTVFVVNDGDEPV PVWLAVDVVALAAAT | |||
| Full Sequence |
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| Protein Sequence Length: 1938 Download |
| MLLSPEARRE PTEHPGVGVA GSPEPDRRAG TATPAPASTP VTLPRILLFV AAVAIAAVAV 60 VLAAAVALQH GSDTDGAACD WGVLLPRLAA PWRPRARGQT HTQPLLRSEG ADVTTSSGSS 120 SSATDFRGGS SSGTGSSTAS NTRAAAQGRR LRIQNRGSAV ATLLLSGPEF GSLDEEQQQQ 180 QPSTSATADS PAAGAAATAA FANWTLSNAN GSIRGLPITI PGYTLQALRD AGLLGAPPDD 240 PRSDPLYRFN DQAYEWVAMD TWTLTGLFDT PLPPVTATAT ATAGQQQQQQ RPATAGATAA 300 TAATAAATAA TAATAAQQGS GGRRSSVGAP RTAGGSQAAA GEAAAAAAAE AVQAAGGGGS 360 SRQQAWSDIV PDVEGEEEEQ EETEEGEEGC GLDLVLSGVD TVADVWLNGV RLGRVANFHR 420 THRFNVRDLL MRRPRPPLLQ GTDSGGSSSS SSGGTSSGGS SSSGSSSSGS SNSSGSSGGS 480 SSRSYGGANN LTIVLHPAVP YVRQQAASYP YPLPSNTAPY AYGQFAFIRK PASDLGWDWG 540 PALAPAGLHG SVRLERYCLP YAAGVHVLEQ VHGGVPTRQP VGRGGGGGGG GGGGSGSSGS 600 SGSSGSSGSS PQEGDGKEKE EGEGEGEGEA VADVASAVTL RLEVEVWVPL PPPGKVSGGD 660 AAASRTGGGG GGGGAAAASA SRDYFLSPSG AAGGGSCPNA EVAAAAAAAG AAAAAAATGT 720 ATGTGTGVGT GAGAAGAAVV VVELRPYNAS SGARLTGSCT ADCGGSGSSS RSGSSSRNGS 780 SNGGGCCPIA RVEKPLSPCV LRSGGRHHVT LEMHLPAAAV ALWWPVGFGP QPLYVLSAWV 840 ESSPAWVESS PDAQQGASAG AAGATATGSS GGGGGGGGGA DGEGTADAGL AGGAGATATA 900 ASGAWRVAAG AGQELPVRRR VGFRTVELVT EPLSGRLSRS GELWDRLQQG EGVQQGEEGK 960 EGNGGKGEQQ QQEPKGGDTS DGGGGGGGGG GGGGGWGGGG GARARASTFP DPPDESFFLR 1020 VNGRPLFVRG ANLIPLALLH TDAAAAGPRA LARLAAAALG AGMNMLRVWG GGRYALDALY 1080 DMADGAGLLL WQEFMFACNP YPNTRDFNEE VRLEAEEQVR RLAGHPSVAL WGGNNEVEAS 1140 LSWYPETAAN PRLFAADFTQ LFVATLKEGV VDRLDPGRPY LDSSPSSGLH TTSVTTAAAT 1200 RGASGPSSGP PTPHVKRWGD PQDPRAGDIH YYNYRDDCLD PATYPRARFI SEYGTQSFAS 1260 AAAVRPYGNA TVGDWAPTSA FMRHRQRHPN GEWELLASLA LHFRQPPSGW TAAPPTAFKL 1320 FEPWIYQLQV QQALCYSTAL GVWRSGRSDP QAATMGVLYW QLNDVWPGYS WSSLDYGGGR 1380 KPLHSAVRRL FRPVTVVAFG REGGNVTVFV VNDGDEPVPV WLAVDVVALA AATPPPDTTT 1440 TTGTTTTTDT TTTDTTTTGT TTTDTTTTTG ANVGAAGDTD GAAGGEAAPN TAGAVVQFAV 1500 LSLTAPPQRS LRALQLPAAQ VLAALPGCGA RTCVVSVRLR EELKAAAAEE VEEEEEEEEE 1560 VVEQEGKEWK EEEDGEEELK QEEGREEEVA AAAVAARWRR PSWPWGGGDP AADEARLMGM 1620 AAWRRPLQPL QPLQPPQPPQ PLQPPAAAAA KAASTVLEAA GTAESTGTSI RTSNRTSIRN 1680 STSTRTRSSS RRTSGSTGGG RGLPGPGGCC AVQQLDGEEV DALVLLVPPK ELLLHPPDLE 1740 MYDIANCTPS ATGATASTAT AAAAAAAAAG GDVLQPSSRQ AASTPQPPQR YSWCFRLRPR 1800 RAAALMVVLE SDAAGDFSEA FHLLLPLQPP GRAPPPPPPP LQPAPPAPEG AATAEPSLLE 1860 RAATAANTEA GQEGGGGREP TEEGTAGPGR GHGRGRAGVG GPAPPPRVCF YTDVVFESAE 1920 AFRSAVRVME LHGMQTF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3250 | LacZ | 1.0e-34 | 1019 | 1398 | 389 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001697308.1 | 6e-25 | 515 | 570 | 13 | 68 | hypothetical protein CHLREDRAFT_176626 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001697308.1 | 0 | 1080 | 1439 | 55 | 282 | hypothetical protein CHLREDRAFT_176626 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001697308.1 | 0.0000000000004 | 1494 | 1545 | 266 | 317 | hypothetical protein CHLREDRAFT_176626 [Chlamydomonas reinhardtii] |
| RefSeq | XP_420666.2 | 0 | 1016 | 1434 | 283 | 673 | PREDICTED: hypothetical protein [Gallus gallus] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2je8_B | 0 | 1004 | 1413 | 310 | 674 | A Chain A, Structure Of A Beta-Mannosidase From Bacteroides Thetaiotaomicron |
| PDB | 2je8_A | 0 | 1004 | 1413 | 310 | 674 | A Chain A, Structure Of A Beta-Mannosidase From Bacteroides Thetaiotaomicron |
| PDB | 2vr4_B | 0 | 1004 | 1413 | 308 | 672 | A Chain A, Structure Of A Beta-Mannosidase From Bacteroides Thetaiotaomicron |
| Transmembrane Domains | |||||
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| Start | End | ||||
| 46 | 68 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GE256651 | 231 | 1074 | 1303 | 0 |
| GE258413 | 192 | 1074 | 1265 | 0 |
| AW564388 | 165 | 1227 | 1391 | 5e-26 |
| CF845481 | 173 | 1274 | 1426 | 3e-24 |
| GO248842 | 126 | 1011 | 1136 | 5e-21 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Ricinus communis | 34550.m000026 | ||||
| Volvox carteri | Vocar20014560m | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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