| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | g12094.t1 |
| Family | GH5 |
| Protein Properties | Length: 1354 Molecular Weight: 136511 Isoelectric Point: 8.007 |
| Chromosome | Chromosome/Scaffold: 12 Start: 547201 End: 554156 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 281 | 654 | 3.5e-26 |
| TRLMEQAAARGLNVVRTWAHSSDTQFPFQIAPGVYLEAALAGLDHVVAAAAAAGLSLVLSLADNWKYAGGVDQYVDWSPTAPPRTRTRPPDTPGDPTGVK VGPPAAPGSSSSSSSSSRNASGATQDQQQQQQQQQLLEGLRYEAARHALFFSDAGARELYRRHAAAVVMRRSTLTGRLYRDEPAILAWSLVNEPRCEVWA APNCTAAVQAWVEEMSAHVRALDPNHLITIGSEGFFGPSTPHLIRHNPGGDGGVWAAGLGQDWVANNAAPHIDFASLHAWPDNWVDTEQLVGDGSAEDGA GESSSIRPKLRRQLPPPSAVAGAAAGAAPAAAAAQRYAAFMADWLTSHLAAAAELLHKPVLLDEFGKKVEPGSS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1354 Download |
| MLNSLSHWRH RGGDVSSATT HPGDGLASTS PLQQRQQQPA AAQAAQQSQP LSSTATGRYH 60 WQRCVPTSRG RRLACVGAVL LLLLVAVVLA GVLVPTLLHR RQQTGVFLDS AAGLTPSTNQ 120 QLPAAPPASA PTVLPAAASG PIAAAARGGD AAPQPQPPDN TAPPLAAAPP DNTAVTSGSS 180 SATGNVSSTT SASISTTNNN TTTTPAASNA TAPAKVQCTH AAGDRAAFGR INAQLHLVRG 240 CSDTRQLLVG FNNYQLAMAA GVVSPKAFQT VGGLSGRQAV TRLMEQAAAR GLNVVRTWAH 300 SSDTQFPFQI APGVYLEAAL AGLDHVVAAA AAAGLSLVLS LADNWKYAGG VDQYVDWSPT 360 APPRTRTRPP DTPGDPTGVK VGPPAAPGSS SSSSSSSRNA SGATQDQQQQ QQQQQLLEGL 420 RYEAARHALF FSDAGARELY RRHAAAVVMR RSTLTGRLYR DEPAILAWSL VNEPRCEVWA 480 APNCTAAVQA WVEEMSAHVR ALDPNHLITI GSEGFFGPST PHLIRHNPGG DGGVWAAGLG 540 QDWVANNAAP HIDFASLHAW PDNWVDTEQL VGDGSAEDGA GESSSIRPKL RRQLPPPSAV 600 AGAAAGAAPA AAAAQRYAAF MADWLTSHLA AAAELLHKPV LLDEFGKKVE PGSSSNSGGS 660 STRERELSEQ GARLSAAAPL PGPAVAEAGL AAVANADQTS VPPPVPKAAA AVPPAVGNTT 720 VVAAPRLADV AGPQTLTATG ATPAAPAPKP QPAGALVGAA AGSPGGSEAA AAGPGSGGAR 780 QGQAAAVAAG AAAIDARKSA ERDAVYNQTY RFLDELLRPS LPLLPPAPPA PAPVPVAAAA 840 PAPPMPSAPQ PHAQPAARSS TNAPNGARSA AVALRGLRSA PAPAAAGVEM PPTPLPQPPP 900 LSMSVTVGGV PVAAASSTNS NLSTSNSSSA ERPLLGSLFW MWQLPLFVGE APDPYGVSGV 960 DDTLFKLVTS HAANLSRLQR RGSPSADSII APDDRLQPQL PEPTPAEEAL GRDSHALPAL 1020 CECRCWNSAV AAAASPHLLN SSSSDSVCYS ADIGGGSGDD RGRGSLTVGP AADEAVAAPA 1080 VAVITQAEML RARNSSDGAA APTPAGSAFN GANSQPQLQP QLLPAGLTML RARVQEAGEV 1140 QALLQPLEPG ACEQQLLRSA LALLSAEEEA LAAAGGGPAA GQHLVMYAAG PQQQQQQQQQ 1200 ALRTYLQRRC RSGGTASGGG GGGGAPRDSS RSAGAGAATL PKAAAASSST APSAAAQPPA 1260 PAPKQQQVAS TGAGHRRRGL LEKVGGMAAA PGMTQGSGAA DAAGSPAFNM GACLRLWVRS 1320 MCSQSSVRSA VAYSNDAGAV AGGEDAARRA DGR* 1380 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 0.006 | 424 | 502 | 81 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG3934 | COG3934 | 0.0004 | 418 | 568 | 161 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| COG3934 | COG3934 | 3.0e-10 | 427 | 526 | 113 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB45852.1 | 4.06377e-44 | 250 | 667 | 50 | 337 | hypothetical protein [Thellungiella halophila] |
| EMBL | CBI33116.1 | 2.94273e-44 | 250 | 646 | 68 | 345 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_201447.1 | 5.60519e-45 | 250 | 652 | 50 | 329 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | XP_001700575.1 | 0 | 258 | 700 | 1 | 443 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_001700575.1 | 0.000000000000005 | 881 | 952 | 528 | 599 | predicted protein [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pzq_A | 5e-23 | 422 | 646 | 137 | 309 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3pzq_A | 0.0004 | 278 | 357 | 43 | 136 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3pzo_A | 5e-23 | 422 | 646 | 137 | 309 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3pzo_A | 0.0004 | 278 | 357 | 43 | 136 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3pzn_A | 5e-23 | 422 | 646 | 137 | 309 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
