| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | g17203.t1 |
| Family | GT49 |
| Protein Properties | Length: 1272 Molecular Weight: 129532 Isoelectric Point: 9.8585 |
| Chromosome | Chromosome/Scaffold: 17 Start: 1909506 End: 1916897 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT49 | 708 | 948 | 6.70003e-41 |
| ARRWCSLDVLLVYEAWSDPRAARALYPVNMLRNWARLQARTPLVAALDVDMLPSRQLLEAVREPDTARQYIEACGPPANTTAGADTGSSSNAIGSSSRRR SSVFILPAFQTANETAAAANIRIADRIANMTKSQLEVAVQVEAALPFHVAHFPAGHSATNFSRWFRAAEPYTVRYVRNFEPWFVAGRDSVPWHDVRLRGY GQNKIIQVAAAAAAGPAVEFRVEPRAFLVHRPHARSGAKQE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1272 Download |
| MAAVAGCNCA PAADASLGCG GTTAAGGGGE GCWSQLPPRR PAGGPAGHQH DGSQQQQQQQ 60 QQPAGGPMCC SGGGVLCEAA VRQQQQTAGP SCAPGVDGGG VGSGRTHMGM DGGCSGGGHW 120 QSLNGGCAGH HPWLSGIQQT WLPSIGGPHG RLLPLSPAGA ATAGLGLQHQ QRHQQQHQPP 180 LACAAGHPPH PRHQQKPAAP TAPPPAAEAG APAPTQPPPP LPAAAAQPPP AKVRQGHQRV 240 RSQQWQVGCT RGPAAGGQGR IHAAQVTSQR SGCSKWLLGG TCGGSSRPHA PRSLLQQLRL 300 LLVSLVLAAA LALFSIVSMT ATAGGGGTPT ATATALAQPH MGPRVQPRRQ LQATAGDPQQ 360 QTAHIAEPSS VAATAQQQQQ QPQREPLGGF SSQLDPLGST TLVSGSSGSG SSGSIFKSSV 420 STKCVGGRQQ GPAGTLLGGS SGGSSNGGSS SSSGSGVTAP LQQCLNNRYG HLVAGWEDVG 480 TARPTAKVLG AWSSCRRSSI PLTVATQLSA NRLQQLRAMC RAWHGPLSAV VYYPLELHDS 540 GSGNSSSSSS DNSGSSSGSG SEQHGAAATE GAVGLAAAAA AAGSAAAGEA GAAGAAGAAE 600 TGGTLRAGRW RAVLQQAEDE AVGGGGSELE VGDGEGDGAD SGGSDADGSS MWAAGGGGSA 660 AIASASGAAA GGAAGERRRP RVQLSVAQLG RLREVVEGVR GFWSEMEARR WCSLDVLLVY 720 EAWSDPRAAR ALYPVNMLRN WARLQARTPL VAALDVDMLP SRQLLEAVRE PDTARQYIEA 780 CGPPANTTAG ADTGSSSNAI GSSSRRRSSV FILPAFQTAN ETAAAANIRI ADRIANMTKS 840 QLEVAVQVEA ALPFHVAHFP AGHSATNFSR WFRAAEPYTV RYVRNFEPWF VAGRDSVPWH 900 DVRLRGYGQN KIIQVAAAAA AGPAVEFRVE PRAFLVHRPH ARSGAKQELG GETAAYRRMY 960 RLALREATAK LLGQLQQRQE QLRQQHAQAA TASRSPQQAL LASSNASSTS NARSIMPTPE 1020 PKQRPTAAGT TGLPPVAAGG GGQSAEAADS IFVPGGASRS SSSNAAAATG TGLGGGGSSI 1080 LGSGDSGDGG DAAAWQDIGV YPHHRSRRRA LLSLFDPVPF SVGSKSVPMH SPVAVPGHSA 1140 VATTAAAVAN AAGSQEGRGP MRPAHTAGTG VDGTGAATSS AALPLSQGGR KKRSWALPPK 1200 LQAEARRQAE ELMLTGRYAE ALRHNVFWSN SRTWAEARKE MAQGRYTPVL DPGTEHCLSV 1260 LPWWSGRGMV H* 1320 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13896 | Glyco_transf_49 | 1.0e-31 | 728 | 946 | 230 | + Glycosyl-transferase for dystroglycan. This glycosyl-transferase brings about the glycosylation of the alpha-dystroglycan subunit. Dystroglycan is an integral member of the skeletal muscular dystrophin glycoprotein complex, which links dystrophin to proteins in the extracellular matrix. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH03159.1 | 2e-19 | 692 | 941 | 75 | 299 | InvC [Volvox carteri f. nagariensis] |
| RefSeq | XP_001691676.1 | 0 | 776 | 1271 | 1 | 496 | hypothetical protein CHLREDRAFT_206250 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001701602.1 | 4e-28 | 731 | 940 | 93 | 313 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_002597499.1 | 1e-19 | 732 | 978 | 462 | 664 | hypothetical protein BRAFLDRAFT_281013 [Branchiostoma floridae] |
| Transmembrane Domains | ||||
|---|---|---|---|---|
| Start | End | |||
| 300 | 322 | |||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FD803838 | 238 | 712 | 949 | 1e-33 |
| GE262039 | 212 | 696 | 907 | 1e-16 |
| GE144920 | 215 | 731 | 945 | 1e-16 |
| GE269621 | 90 | 854 | 943 | 2e-16 |
| FD929862 | 117 | 837 | 952 | 7e-16 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |