| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | g5804.t1 |
| Family | GH42 |
| Protein Properties | Length: 580 Molecular Weight: 63011.1 Isoelectric Point: 8.2113 |
| Chromosome | Chromosome/Scaffold: 6 Start: 1278153 End: 1284475 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH42 | 104 | 334 | 3.2e-24 |
| STLQSMQAAGIKTVMFSLEWGWFEQAEGQLNWAHVDLLAGTACNSTKLKVAMIVDVLRAPGWLFRKWPHSRSFDAGGRNYSHLSWFHAGANAVALDRLQQ VATRLSGQFGSCAVAIQPAYNNEYEAKFTQEYDAYQDYNPHGLDTFRGWLQRRQPDLAAINNRWGTKFSKWEEVAPPRLFAGAVMGPDDSARFWDWMRFR TEAGADVLNGACRTVQAAGLQCFHHFPEFFS | |||
| Full Sequence |
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| Protein Sequence Length: 580 Download |
| MAISGASRKA REGWGFGRVL LLAASLCLVG TALLFLYELG GTSNISGKHV GSAKLTALVS 60 RLRGGSGRFV RTTEVGDIFG TLFHSELVGI IKVQDAGGGS RLLSTLQSMQ AAGIKTVMFS 120 LEWGWFEQAE GQLNWAHVDL LAGTACNSTK LKVAMIVDVL RAPGWLFRKW PHSRSFDAGG 180 RNYSHLSWFH AGANAVALDR LQQVATRLSG QFGSCAVAIQ PAYNNEYEAK FTQEYDAYQD 240 YNPHGLDTFR GWLQRRQPDL AAINNRWGTK FSKWEEVAPP RLFAGAVMGP DDSARFWDWM 300 RFRTEAGADV LNGACRTVQA AGLQCFHHFP EFFSVLDAIY GATMFPLIAG SNATDFVIMD 360 SNFRTPYGTL MDPSKLRFYV AAARAFGKRT YFEAAVERYA SMNLLEAGYR NALLAGAPNL 420 GLTNWLTRVE MNASLTRALL ATSRPACAAD EVVGVFLHLD SCAAFHGPQW QWARKDPLHD 480 FVEELALRLT ARCETDIAVF ISLPALTAAL PSLDRVVFVE PLLLPGGAAE LGAYVAAKAA 540 LRASGLPVEA LRLPGNGTGG LALKVLDRLE GGGEAVWKE* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 7.0e-7 | 106 | 305 | 214 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-10 | 106 | 306 | 214 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001699637.1 | 0 | 296 | 569 | 17 | 290 | hypothetical protein CHLREDRAFT_141593 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001699638.1 | 0 | 106 | 569 | 1 | 452 | hypothetical protein CHLREDRAFT_141595 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001702441.1 | 0 | 81 | 462 | 78 | 446 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | YP_723893.1 | 3e-26 | 112 | 441 | 619 | 954 | hypothetical protein Tery_4433 [Trichodesmium erythraeum IMS101] |
| RefSeq | ZP_05648480.1 | 0.000000006 | 102 | 309 | 28 | 228 | beta-galactosidase [Enterococcus gallinarum EG2] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1kwk_A | 0.0000000008 | 87 | 339 | 1 | 252 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 1kwg_A | 0.0000000008 | 87 | 339 | 1 | 252 | A Chain A, Crystal Structure Of Thermus Thermophilus A4 Beta-Galactosidase |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
| Start | End | ||||
| 13 | 35 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BI999373 | 204 | 268 | 471 | 0 |
| BI724308 | 204 | 145 | 348 | 0 |
| BI816504 | 181 | 229 | 409 | 0 |
| BM001619 | 132 | 229 | 360 | 0 |
| BI724602 | 179 | 268 | 446 | 1.4013e-45 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | Cre02.g117250.t1.3 | Cre02.g117250.t2.1 | Cre02.g119700.t1.3 | ||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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