| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | g8002.t1 |
| Family | GH5 |
| Protein Properties | Length: 1415 Molecular Weight: 143985 Isoelectric Point: 6.1132 |
| Chromosome | Chromosome/Scaffold: 7 Start: 4562173 End: 4573893 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 601 | 945 | 9.2e-28 |
| TGRPFYFIGFNAHWLPNLANFEHEWGRTQAAHFMASAQRLGMRVGRWWAFNRGLPLNPGEYDEDQFLGLDYCLYLASKFGLRVILALTNLWPQYRGPEHY LYMATGSAEGKTVLDYYRDRSTRELVKRHFDVMVNRVNAYNGRRYGDDPTILGWDVMNEPRCPGCSPAEVGIKLDWLREMSAYLRSIDSHHLITQGSEGY FMPDPETNAHLLNPGAGAQCEGEDWVATVSMKNHDFACVHVYERQLEALPFNPDPRRNDPTWKKCDFVCYINWFTRYMEAHVEVARRIGKPLLLEEYGLT WWREWEYDRRVLLQVSFEQLIDSARAGGPLAGALFWNAAANSTGD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1415 Download |
| MLDEGGGGTP RAPPGGTHVT SGSSRRPPGK RVRGSSAAAA AAAAAAAAAA TARRPDDGGG 60 VGYHGCSSSG GGGHGGSSGG GVGYGSSRGR HGGRAVPVGR RAVLAAVAAA MPLLLLAVVA 120 VMLQPLPGCG GAMAAQLPGD AGGSSRISSV GGGGRTGSST AGSSSREGTE KSSRSRSKSS 180 SNGAVPGSSD TVLLPPMALE HQRHLQPPRQ QLPHPPAVAA PPQAPEAVAA AVRAEEEQQQ 240 GASNAPAALV ASEAQLLAEV AVAAAELAVE AAAVAAEAAQ MAAAELTTAA AVAAKEEEEE 300 DDGDAEGEVQ AAAAAKAGAT EAAVTAAGGW GGPQEDEEAA PGAAAASAAA GGGGRGLLQA 360 SRAPTVISLG PGNAPGPPQP APQPKAAAAG AGQGAGTPTA APAAPAQTPP PAQTPPPAAA 420 PAAPAAVGTA PSLGAAAAPA PAPTASRAAA VPPAPAPTAA ATPTITATPA AASPSAAAAD 480 AASATAIPLP AAAAATAATA ATAVPSVPAA ATAAAAPIAA PAAPVATAPV ATTTPATAAS 540 AAAATAATVR LTGQRYTKDT RAVDSADVIL IRPPLVTPSP PVPPQSAFVS IRGHQFIDPA 600 TGRPFYFIGF NAHWLPNLAN FEHEWGRTQA AHFMASAQRL GMRVGRWWAF NRGLPLNPGE 660 YDEDQFLGLD YCLYLASKFG LRVILALTNL WPQYRGPEHY LYMATGSAEG KTVLDYYRDR 720 STRELVKRHF DVMVNRVNAY NGRRYGDDPT ILGWDVMNEP RCPGCSPAEV GIKLDWLREM 780 SAYLRSIDSH HLITQGSEGY FMPDPETNAH LLNPGAGAQC EGEDWVATVS MKNHDFACVH 840 VYERQLEALP FNPDPRRNDP TWKKCDFVCY INWFTRYMEA HVEVARRIGK PLLLEEYGLT 900 WWREWEYDRR VLLQVSFEQL IDSARAGGPL AGALFWNAAA NSTGDYDGYN VYISRTPKTP 960 GKPAPFAYGP TRGSVFPGPN PDVSMVPIPI PSRSSTSSSS TSGAAAAGGT SSSSSSSSTQ 1020 TPQPVSKRPT ASATATAAAA AAAEVAAAAA ATAALAAPAP NALPLQPPSA LLPAGATLAV 1080 APTAAQVAAA AAAAAAATAA TAAAAADDPL AAVAAVNRVK RRRLLARPRA VAADAEADTT 1140 DATTTTAADD AEGSSNGAGS STVDATAAAS AASGGYIRMS DLPDSVHPAL LELLEGGRLG 1200 GLGGPGPDGG GGGGGGPGGG GGGRGPRVRR QTRRQARDDG DDDEERREGQ RGWQGEDREE 1260 EEEEAEGGKA LGGGPAAARQ RQQRQQQERR ERPERVGGEE GRQREARRER EEVREREEGR 1320 EREEGQESLP WWLLGQQEGF GGRRRRRLQE VVGQIDALDG FRRAWQRNDC AVRNSVVWRP 1380 PPLPSHVNYT AYRDYVEGLD AVDIIAWATA QLPN* 1440 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 0.003 | 600 | 900 | 315 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 0.0005 | 646 | 951 | 318 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam12876 | Cellulase-like | 0.0003 | 743 | 796 | 61 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| COG3934 | COG3934 | 3.0e-16 | 601 | 898 | 302 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_171733.2 | 0 | 582 | 962 | 23 | 388 | glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | XP_001692424.1 | 0 | 636 | 975 | 6 | 275 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_001692424.1 | 1e-21 | 1368 | 1414 | 247 | 293 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_002309191.1 | 0 | 589 | 959 | 18 | 374 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002323680.1 | 0 | 589 | 959 | 18 | 373 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 1.4013e-45 | 588 | 959 | 6 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 2e-39 | 592 | 958 | 17 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 2e-39 | 592 | 958 | 17 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 2e-39 | 592 | 958 | 17 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 2e-39 | 592 | 958 | 17 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
