| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | g8002.t2 |
| Family | GH5 |
| Protein Properties | Length: 1232 Molecular Weight: 128202 Isoelectric Point: 5.9519 |
| Chromosome | Chromosome/Scaffold: 7 Start: 4562173 End: 4573893 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 418 | 762 | 7.1e-28 |
| TGRPFYFIGFNAHWLPNLANFEHEWGRTQAAHFMASAQRLGMRVGRWWAFNRGLPLNPGEYDEDQFLGLDYCLYLASKFGLRVILALTNLWPQYRGPEHY LYMATGSAEGKTVLDYYRDRSTRELVKRHFDVMVNRVNAYNGRRYGDDPTILGWDVMNEPRCPGCSPAEVGIKLDWLREMSAYLRSIDSHHLITQGSEGY FMPDPETNAHLLNPGAGAQCEGEDWVATVSMKNHDFACVHVYERQLEALPFNPDPRRNDPTWKKCDFVCYINWFTRYMEAHVEVARRIGKPLLLEEYGLT WWREWEYDRRVLLQVSFEQLIDSARAGGPLAGALFWNAAANSTGD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1232 Download |
| MLDEGGGGTP RAPPGGTHVT SGSSRRPPGK RVRGSSAAAA AAAAAAAAAA TARRPDDGGG 60 VGYHGCSSSG GGGHGGSSGG GVGYGSSRGR HGGRAVPVGR RAVLAAVAAA MPLLLLAVVA 120 VMLQPLPGCG GAMAAQLPGD AGGSSRISSV GGGGRTGSST AGSSSREGTE KSSRSRSKSS 180 SNGAVPGSSD TVLLPPMALE HQRHLQPPRQ QLPHPPAVAA PPQAPEAVAA AVRAEEEQQQ 240 GASNAPAALV ASEAQLLAEV AVAAAELAVE AAAVAAEAAQ MAAAELTTAA AVAAKEEEEE 300 DDGDAEGEVQ AAAAAKAGAT EAAVTAAGGW GGPQEDEEAA PGAAAASAAA GGGGRGLLQA 360 SRAPTVISLG PRYTKDTRAV DSADVILIRP PLVTPSPPVP PQSAFVSIRG HQFIDPATGR 420 PFYFIGFNAH WLPNLANFEH EWGRTQAAHF MASAQRLGMR VGRWWAFNRG LPLNPGEYDE 480 DQFLGLDYCL YLASKFGLRV ILALTNLWPQ YRGPEHYLYM ATGSAEGKTV LDYYRDRSTR 540 ELVKRHFDVM VNRVNAYNGR RYGDDPTILG WDVMNEPRCP GCSPAEVGIK LDWLREMSAY 600 LRSIDSHHLI TQGSEGYFMP DPETNAHLLN PGAGAQCEGE DWVATVSMKN HDFACVHVYE 660 RQLEALPFNP DPRRNDPTWK KCDFVCYINW FTRYMEAHVE VARRIGKPLL LEEYGLTWWR 720 EWEYDRRVLL QVSFEQLIDS ARAGGPLAGA LFWNAAANST GDYDGYNVYI SRTPKTPGKP 780 APFAYGPTRG SVFPGPNPDV SMVPIPIPSR SSTSSSSTSG AAAAGGTSSS SSSSSTQTPQ 840 PVSKRPTASA TATAAAAAAA EVAAAAAATA ALAAPAPNAL PLQPPSALLP AGATLAVAPT 900 AAQVAAAAAA AAAATAATAA AAADDPLAAV AAVNRVKRRR LLARPRAVAA DAEADTTDAT 960 TTTAADDAEG SSNGAGSSTV DATAAASAAS GGYIRMSDLP DSVHPALLEL LEGGRLGGLG 1020 GPGPDGGGGG GGGPGGGGGG RGPRVRRQTR RQARDDGDDD EERREGQRGW QGEDREEEEE 1080 EAEGGKALGG GPAAARQRQQ RQQQERRERP ERVGGEEGRQ REARREREEV REREEGRERE 1140 EGQESLPWWL LGQQEGFGGR RRRRLQEVVG QIDALDGFRR AWQRNDCAVR NSVVWRPPPL 1200 PSHVNYTAYR DYVEGLDAVD IIAWATAQLP N* 1260 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 0.003 | 417 | 717 | 315 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 0.0004 | 463 | 768 | 318 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam12876 | Cellulase-like | 0.0003 | 560 | 613 | 61 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| COG3934 | COG3934 | 3.0e-16 | 418 | 715 | 302 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF69949.1 | 0 | 405 | 776 | 25 | 379 | (1-4)-beta-mannan endohydrolase (mannan endo-1,4-beta-mannosidase), putative [Musa acuminata] |
| RefSeq | NP_171733.2 | 0 | 399 | 779 | 23 | 388 | glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | NP_187701.1 | 0 | 401 | 765 | 25 | 376 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | XP_001692424.1 | 0 | 453 | 792 | 6 | 275 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_001692424.1 | 1e-21 | 1185 | 1231 | 247 | 293 | predicted protein [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 405 | 776 | 6 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 3e-38 | 409 | 775 | 17 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 3e-38 | 409 | 775 | 17 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 3e-38 | 409 | 775 | 17 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 3e-38 | 409 | 775 | 17 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
