| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | g9090.t1 |
| Family | GH125 |
| Protein Properties | Length: 541 Molecular Weight: 59329.8 Isoelectric Point: 6.5773 |
| Chromosome | Chromosome/Scaffold: 9 Start: 30838 End: 36145 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH125 | 90 | 484 | 0 |
| QLAALCGRCLHQTITKSVEVRGIGHSVFVATGDIPDEWLRDGSVQLAVYLPRLAEHPVLRQLIEGAIRTQAYFILSDPWANSFRKDWAKPEALPKFDRQI GRGGWVATRNFEVDSGAYFLNLLWNYASTPGALWGAAAFLNDSLLHDAAALMVDTWTLEQRHEERSPYRYAELPREGRGAASNYTGMLWSGFRPSDDPNT YGYNIPVNMYAAGSLERLAALNELVWRDAALGAAARRLAADIRAGIDKFGVVPVPGDPGGARMYAYEVDGLGGVLASFDDPNIPSLLAMPLLGYPHYDPQ LYAATRRRILSPANSHYFQGSQLRGCGSPHTPTNYVWSLAHCVQGLTSPDPVERADMFRQLLQMQGDNGLMHESNDVNDPRRLTRPLFQWANTML | |||
| Full Sequence |
|---|
| Protein Sequence Length: 541 Download |
| MEVGSRSHRK LVTELPAHNA RSTPAIGTRQ PPPQPLTYAL ASDTGSLFGG SGWPSLTRAS 60 AEVWAAGTLG ANTSLAAAVE GALQPQEREQ LAALCGRCLH QTITKSVEVR GIGHSVFVAT 120 GDIPDEWLRD GSVQLAVYLP RLAEHPVLRQ LIEGAIRTQA YFILSDPWAN SFRKDWAKPE 180 ALPKFDRQIG RGGWVATRNF EVDSGAYFLN LLWNYASTPG ALWGAAAFLN DSLLHDAAAL 240 MVDTWTLEQR HEERSPYRYA ELPREGRGAA SNYTGMLWSG FRPSDDPNTY GYNIPVNMYA 300 AGSLERLAAL NELVWRDAAL GAAARRLAAD IRAGIDKFGV VPVPGDPGGA RMYAYEVDGL 360 GGVLASFDDP NIPSLLAMPL LGYPHYDPQL YAATRRRILS PANSHYFQGS QLRGCGSPHT 420 PTNYVWSLAH CVQGLTSPDP VERADMFRQL LQMQGDNGLM HESNDVNDPR RLTRPLFQWA 480 NTMLVVYYEQ TFGRSCSQAA EALRLKGVSE REARETLTPR NGGPDLPAYY DRLEQSIPHV 540 * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3538 | COG3538 | 6.0e-97 | 87 | 483 | 410 | + Uncharacterized conserved protein [Function unknown] | ||
| pfam06824 | DUF1237 | 3.0e-109 | 89 | 483 | 406 | + Protein of unknown function (DUF1237). This family contains a number of hypothetical proteins of about 450 residues in length. Their function is unknown, and most are bacterial. However, structurally this family is part of the 6 hairpin glycosidase superfamily, suggesting a glycosyl hydrolase function. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001695184.1 | 0 | 127 | 484 | 1 | 357 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_002183418.1 | 0 | 73 | 518 | 80 | 531 | predicted protein [Phaeodactylum tricornutum CCAP 1055/1] |
| RefSeq | YP_003241779.1 | 0 | 90 | 485 | 26 | 416 | hypothetical protein GYMC10_1689 [Geobacillus sp. Y412MC10] |
| RefSeq | ZP_02692552.1 | 0 | 90 | 485 | 25 | 415 | hypothetical protein Epulo_05354 [Epulopiscium sp. 'N.t. morphotype B'] |
| RefSeq | ZP_05129785.1 | 0 | 90 | 494 | 31 | 429 | conserved hypothetical protein [Clostridium sp. 7_2_43FAA] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2nvp_A | 0 | 87 | 495 | 24 | 427 | A Chain A, X-Ray Crystal Structure Of Protein Cpf_0428 From Clostridium Perfringens. Northeast Structural Genomics Consortium Target Cpr63 |
| PDB | 3qt9_A | 0 | 87 | 495 | 24 | 427 | A Chain A, X-Ray Crystal Structure Of Protein Cpf_0428 From Clostridium Perfringens. Northeast Structural Genomics Consortium Target Cpr63 |
| PDB | 3qt3_A | 0 | 87 | 495 | 24 | 427 | A Chain A, Analysis Of A New Family Of Widely Distributed Metal-Independent Alpha-Mannosidases Provides Unique Insight Into The Processing Of N- Linked Glycans, Clostridium Perfringens Cpe0426 Apo-Structure |
| PDB | 3qsp_B | 0 | 97 | 485 | 31 | 416 | A Chain A, Analysis Of A New Family Of Widely Distributed Metal-Independent Alpha-Mannosidases Provides Unique Insight Into The Processing Of N- Linked Glycans, Clostridium Perfringens Cpe0426 Apo-Structure |
| PDB | 3qsp_A | 0 | 97 | 485 | 31 | 416 | A Chain A, Analysis Of A New Family Of Widely Distributed Metal-Independent Alpha-Mannosidases Provides Unique Insight Into The Processing Of N- Linked Glycans, Clostridium Perfringens Cpe0426 Apo-Structure |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| FD876592 | 109 | 50 | 158 | 0 |
| CX301593 | 240 | 248 | 484 | 3.9937e-43 |
| GE253657 | 145 | 394 | 537 | 1e-36 |
| FC510600 | 234 | 236 | 442 | 7e-33 |
| CT901924 | 246 | 94 | 315 | 1e-32 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Physcomitrella patens | Pp1s2536_2V6.1 | ||||
| Volvox carteri | Vocar20005683m | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |