Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a001120m |
Family | GT92 |
Protein Properties | Length: 884 Molecular Weight: 99517.6 Isoelectric Point: 9.7003 |
Chromosome | Chromosome/Scaffold: 109 Start: 638644 End: 642992 |
Description | zinc finger (C3HC4-type RING finger) family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT92 | 284 | 496 | 8e-22 |
ICVCTMLRNQARFLPEWFTYHASIGIRNWFIYDNNSDDEIERVVESMAGENHSVTRVVWPWIKSQEAGFAHCALRARDSCEWVGFIDVDEFIHLPSNSSL LDVIDSQSKLPSSSNSREVGEIRVSCHDFGPSGLKEMPAKGVTVGYTCRMGAPERHKSIVRPEALNSSLINYVHHFQLKAGFRVVNLNRREVVINHYKYQ VWAVFKEKFYRRV |
Full Sequence |
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Protein Sequence Length: 884 Download |
MGFKDRKNRS CLPRPVFLLW CTLVFLLVSG FTFSTLRLFS TREGSYTRLV SKLNIPAMEV 60 KSGDHSANPS ITIRETVIFP DQVLFFLKYP PSTALVTKDD LNCVYTPPNS SAQPLLDVTP 120 SSIESGSYDK NHHQIVRCPL DPRGGIVSLA VKHNHGNNLS SGPTYRWNSL AYEAMIDQQD 180 NSTIVFVKGL NLGSGKSANP SKFKCIYGSH LTGSNNSALW ADAVSAAQEI VRCRTPLSVL 240 NNTTSNGSVK VSVKVAGRKT LDSIARVKNH HRHRQLGPKK KHKICVCTML RNQARFLPEW 300 FTYHASIGIR NWFIYDNNSD DEIERVVESM AGENHSVTRV VWPWIKSQEA GFAHCALRAR 360 DSCEWVGFID VDEFIHLPSN SSLLDVIDSQ SKLPSSSNSR EVGEIRVSCH DFGPSGLKEM 420 PAKGVTVGYT CRMGAPERHK SIVRPEALNS SLINYVHHFQ LKAGFRVVNL NRREVVINHY 480 KYQVWAVFKE KFYRRVAAYV SDWQEKTNVG SKDRTPGLGT KPVEPADWSS RFCEVNDTGL 540 RNRKNENLFS PRFRSVAAMA GWDEEALLIA SLIVEDTPDR QFKQKRRSDL QSFKTPPTNS 600 RRKRKAQKRS PAPVVVLNLD EDDSNSKQED EKINKEANIT EEVEKKQGDD EVNTKGSSVS 660 GSIPAIPCID RLREELSCAI CLEICYEPST TPCGHSFCKK CLRSAADRCG KKCPKCRQLI 720 SNSRYCTVNT VLWNTIQLLF PQEVEARKLA DSSSSSDNQE PKKESPPKTR SRHYTRNRGV 780 EALNSPPSEN RDQDRRTQRI RNRSLRASSA STTTTTTRVE LPIQDEDAAL ALRLQREEFM 840 EAFRVPQRQP EDDSRNSFGV ARANLRAMAS RAINIRIRGR NGY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13923 | zf-C3HC4_2 | 7.0e-9 | 674 | 718 | 46 | + Zinc finger, C3HC4 type (RING finger). | ||
smart00184 | RING | 4.0e-9 | 678 | 716 | 40 | + Ring finger. E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s) | ||
cd00162 | RING | 3.0e-11 | 678 | 720 | 44 | + RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H) | ||
pfam13704 | Glyco_tranf_2_4 | 1.0e-12 | 291 | 387 | 99 | + Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, | ||
pfam01697 | Glyco_transf_92 | 1.0e-39 | 280 | 514 | 256 | + Glycosyltransferase family 92. Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI17696.1 | 0 | 18 | 543 | 48 | 563 | unnamed protein product [Vitis vinifera] |
EMBL | CBI17696.1 | 0 | 546 | 877 | 640 | 947 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189369.1 | 0 | 66 | 873 | 71 | 909 | zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] |
RefSeq | XP_002270991.1 | 0 | 18 | 880 | 15 | 904 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300081.1 | 0 | 3 | 880 | 1 | 913 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3l11_A | 0.00000000004 | 675 | 761 | 15 | 108 | A Chain A, Crystal Structure Of The Ring Domain Of Rnf168 |
PDB | 2ysj_A | 0.00000006 | 669 | 716 | 14 | 63 | A Chain A, Solution Structure Of The Ring Domain (1-56) From Tripartite Motif-containing Protein 31 |
PDB | 2ysl_A | 0.00000008 | 669 | 717 | 14 | 64 | A Chain A, Solution Structure Of The Ring Domain (1-66) From Tripartite Motif-containing Protein 31 |
PDB | 1z6u_B | 0.0000001 | 669 | 747 | 72 | 150 | A Chain A, Np95-Like Ring Finger Protein Isoform B [homo Sapiens] |
PDB | 1z6u_A | 0.0000001 | 669 | 747 | 72 | 150 | A Chain A, Np95-Like Ring Finger Protein Isoform B [homo Sapiens] |