Basic Information | |
---|---|
Species | Mimulus guttatus |
Cazyme ID | mgv1a002012m |
Family | GT5 |
Protein Properties | Length: 727 Molecular Weight: 80560.3 Isoelectric Point: 5.8537 |
Chromosome | Chromosome/Scaffold: 233 Start: 64622 End: 69243 |
Description | starch synthase 2 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT5 | 236 | 719 | 0 |
NVILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYGDYAEAQDLGVRKRYKVDGQDMEVNYFHAYIDGVDFVFIDSPIFRGLGSNIYGGNRV DILKRMTLFCKAAVEVPWHVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGLMKYTRSVLVIHNIAHQGRGPVNDFAYVDLPPHYLDIFKLYDPL GGDHFNIFAAGLKAADRVVTVSHGYSWELKTPEGGWGLNGIINDNDWKLRGIVNGIDTKEWSPESDIHLQSDGYTSYSLDTLKTGKPQCKRALQNELGLP VREDIPLIGFIGRLDDQKGVDLIAEAVPWLMDQDVQLVMLGSGRPDLEDLLRRFEGEYYDRARGWVGFSVKTAHRITAGADVLLMPSRFEPCGLNQLYAM RYGTVPVVHAVGGLRDTVRAFDPFSETGLGWTFGRADVGEMIHALGNCLWTYREFKQSWEGIQRRGMEQDLSWDNAAQNYEEVL |
Full Sequence |
---|
Protein Sequence Length: 727 Download |
MASMGSFPTG LDGSILLHSA NHQRPVIPIL AYRPRKLSLC NGCSGGRRRW AAQHVKATKE 60 GTERVESDDE SDDALHATIE KSRKVLALQR DLLQQIAERK KLVSSIKNSI NDPEGSEEPY 120 IESNVTIPNL DPVATEVLSM ASKSSVKPSP EYPYNDVKNT TETIISGSKT SMEEDSGKPL 180 KDTTVKTAVL SDIPSSKEIV QSEDLKKWSP ESALSVEEPT NEEVKPPPLA GANVMNVILV 240 AAECAPWSKT GGLGDVAGAL PKALARRGHR VMVVAPRYGD YAEAQDLGVR KRYKVDGQDM 300 EVNYFHAYID GVDFVFIDSP IFRGLGSNIY GGNRVDILKR MTLFCKAAVE VPWHVPCGGV 360 CYGDGNLAFI ANDWHTALLP VYLKAYYRDH GLMKYTRSVL VIHNIAHQGR GPVNDFAYVD 420 LPPHYLDIFK LYDPLGGDHF NIFAAGLKAA DRVVTVSHGY SWELKTPEGG WGLNGIINDN 480 DWKLRGIVNG IDTKEWSPES DIHLQSDGYT SYSLDTLKTG KPQCKRALQN ELGLPVREDI 540 PLIGFIGRLD DQKGVDLIAE AVPWLMDQDV QLVMLGSGRP DLEDLLRRFE GEYYDRARGW 600 VGFSVKTAHR ITAGADVLLM PSRFEPCGLN QLYAMRYGTV PVVHAVGGLR DTVRAFDPFS 660 ETGLGWTFGR ADVGEMIHAL GNCLWTYREF KQSWEGIQRR GMEQDLSWDN AAQNYEEVLL 720 AAKYQW* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 1.0e-84 | 235 | 723 | 519 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 5.0e-135 | 235 | 717 | 506 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 1.0e-166 | 235 | 718 | 492 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 0 | 235 | 722 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 236 | 719 | 495 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV25894.1 | 0 | 1 | 726 | 1 | 751 | starch synthase isoform II [Manihot esculenta] |
RefSeq | NP_186767.1 | 0 | 11 | 726 | 21 | 792 | AtSS2 (starch synthase 2); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | Q43847 | 0 | 11 | 726 | 1 | 767 | SSY2_SOLTU RecName: Full=Granule-bound starch synthase 2, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase II; Short=GBSS-II; Short=SS II; Flags: Precursor |
RefSeq | XP_002278470.1 | 0 | 1 | 726 | 1 | 772 | PREDICTED: similar to starch synthase [Vitis vinifera] |
RefSeq | XP_002531856.1 | 0 | 1 | 726 | 1 | 754 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 235 | 720 | 10 | 509 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 3vue_A | 0 | 235 | 720 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 235 | 718 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 235 | 718 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 235 | 718 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO777841 | 319 | 409 | 727 | 0 |
HO777841 | 369 | 66 | 417 | 0 |
HO781048 | 393 | 335 | 727 | 0 |
HO445868 | 438 | 290 | 727 | 0 |
HO781048 | 41 | 294 | 334 | 0.018 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|