y
Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a003946m |
Family | GH14 |
Protein Properties | Length: 554 Molecular Weight: 61881.1 Isoelectric Point: 8.2031 |
Chromosome | Chromosome/Scaffold: 94 Start: 445589 End: 448234 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 92 | 506 | 0 |
FVMLPLDTVSIGGSLNKSRAMFASLMALKSGGVEGVMVDAWWGLVEKDGPMKYNWEGYAELIKMVEKLGLKIQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDKSGRRNPEYISLGCDSLPVLRGRTPIQVYSDFMTSFRERFKAYLGEVVVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMR ASLAAAAEAIGKDDWGRGGPHDAGQYNQFPDDTGFFRKDGTWNSEYGHFFLEWYSGNLINHGEKILAAAERVFEGTGAKLSGKVAGIHWHYKTRSHAAEL TAGYYNTRHRDGYLPIARMLSKHRVVLNFTCMEMKDGEQPNEANCSPEGLVRQVKMATKTARIDLAGENALERYDGGAYSQVLETSRSDSGNGLSAFTYL RLNKRLFEPENWRNL |
Full Sequence |
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Protein Sequence Length: 554 Download |
MALALHSSTP LINLKENRGF RNPDDSSTTV GFAKMKPTCQ LRAKNSTQES QISRTERERS 60 FSHTIHELQR EKLHGMASPH SHSSTNVRVP VFVMLPLDTV SIGGSLNKSR AMFASLMALK 120 SGGVEGVMVD AWWGLVEKDG PMKYNWEGYA ELIKMVEKLG LKIQVVMSFH QCGGNVGDSC 180 SIPLPPWVLE EISKNPDLVY TDKSGRRNPE YISLGCDSLP VLRGRTPIQV YSDFMTSFRE 240 RFKAYLGEVV VEIQVGMGPC GELRYPSYPE SNGTWRFPGI GEFQCYDKYM RASLAAAAEA 300 IGKDDWGRGG PHDAGQYNQF PDDTGFFRKD GTWNSEYGHF FLEWYSGNLI NHGEKILAAA 360 ERVFEGTGAK LSGKVAGIHW HYKTRSHAAE LTAGYYNTRH RDGYLPIARM LSKHRVVLNF 420 TCMEMKDGEQ PNEANCSPEG LVRQVKMATK TARIDLAGEN ALERYDGGAY SQVLETSRSD 480 SGNGLSAFTY LRLNKRLFEP ENWRNLVEFV RSMSEGGQRT RLPDSDRIGS DLFVGFVKQS 540 NVRKTISEVA LVL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 9.0e-149 | 83 | 514 | 443 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 1.0e-172 | 92 | 509 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 552 | 554 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 89 | 516 | 434 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 89 | 532 | 452 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK84008.1 | 0 | 1 | 552 | 1 | 545 | AF393847_1 beta-amylase PCT-BMYI [Solanum tuberosum] |
RefSeq | XP_002282871.1 | 0 | 1 | 552 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 552 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 552 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 552 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 89 | 513 | 12 | 441 | A Chain A, Crystal Structure Of Spore Coat Polysaccharide Biosynthesis Protein Spse (Bsu37870) From Bacillus Subtilis At 2.38 A Resolution |
PDB | 1q6c_A | 0 | 89 | 513 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 89 | 513 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 89 | 513 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 89 | 513 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103692 | 456 | 89 | 544 | 0 |
HO794833 | 415 | 127 | 541 | 0 |
HO781538 | 410 | 28 | 436 | 0 |
HO825836 | 392 | 163 | 554 | 0 |
CK293967 | 311 | 163 | 473 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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