Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a006100m |
Family | PL1 |
Protein Properties | Length: 458 Molecular Weight: 51225.2 Isoelectric Point: 6.7159 |
Chromosome | Chromosome/Scaffold: 17 Start: 1507876 End: 1509817 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 112 | 317 | 0 |
IQTEPLWIVFPTNMLIHLSQELIFNSYKTLDGRGANVHITGGGCLTLQYVSNIIIHNIHIHHCYQSGETNVRSSPTHYGWRTKSDGDGISIFGARDIWID HCALSHCKDGLIDAVMGSTAITVSNNHFSHHNEVMLLGHSDDYLPDSGMQVTIAFNIFGHKLIQRMPRCRRGYIHVVNNDFTRWEMYAIGGSGNPTINSQ GNRYIA |
Full Sequence |
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Protein Sequence Length: 458 Download |
MNNLTVLPGQ HPNPEAVAQH VHRIVNTSLS RREMLSYTTH EDSSNCVTGN PIDDCWRCDP 60 NWRLNRQRLA DCAIGFGRNA LGGKNGRYYV VTDSSDRDAV NPTPGTLRYA VIQTEPLWIV 120 FPTNMLIHLS QELIFNSYKT LDGRGANVHI TGGGCLTLQY VSNIIIHNIH IHHCYQSGET 180 NVRSSPTHYG WRTKSDGDGI SIFGARDIWI DHCALSHCKD GLIDAVMGST AITVSNNHFS 240 HHNEVMLLGH SDDYLPDSGM QVTIAFNIFG HKLIQRMPRC RRGYIHVVNN DFTRWEMYAI 300 GGSGNPTINS QGNRYIAPFD RNAKEVTKRV GSSEGNWRDW NWRSEGDVLV NGAYFVASGE 360 GVEVKYEKAY STEPKSAAYI DQLTLNAGVL VSRGNNLGKW TSESGGDLDE NSDMFEDYDE 420 YSGSHRLHSN HSILQTFITT LIIFLLLTLH HNLSVQM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 3.0e-19 | 198 | 313 | 128 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 5.0e-56 | 131 | 315 | 207 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 3.0e-64 | 124 | 318 | 206 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM61400.1 | 0 | 3 | 447 | 26 | 472 | pectate lyase-like protein [Arabidopsis thaliana] |
EMBL | CAB64222.1 | 0 | 1 | 447 | 5 | 453 | pectate lyase-like protein [Arabidopsis thaliana] |
RefSeq | NP_566979.1 | 0 | 1 | 447 | 25 | 473 | pectate lyase family protein [Arabidopsis thaliana] |
RefSeq | XP_002265853.1 | 0 | 1 | 403 | 137 | 538 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002519460.1 | 0 | 1 | 449 | 23 | 479 | Pectate lyase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 50 | 391 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 50 | 391 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 1e-16 | 119 | 317 | 50 | 248 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1vbl_A | 0.00000000000009 | 143 | 290 | 138 | 299 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1pe9_B | 0.0000000000007 | 163 | 388 | 115 | 357 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |