Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a006571m |
Family | PL1 |
Protein Properties | Length: 439 Molecular Weight: 48876.6 Isoelectric Point: 9.2705 |
Chromosome | Chromosome/Scaffold: 92 Start: 678097 End: 684450 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 153 | 357 | 0 |
IQDRPLWIVFKRDMVITLKQELIMNSFKTIDARGANVHIAGGACITIQYVTNIIIHGLHIHDCRRTGNAMVRASPSHYGWRTMADGDGISIFGASHIWID HNSLSSCADGLIDAIMGSTAITISNNFFTHHNEVILLGHSDSYTRDRAMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ GNRYL |
Full Sequence |
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Protein Sequence Length: 439 Download |
MAISLRIIPL CAFLTALLFF NAIALSERTE EIRQRKSLRN LRNSTMAERL EEFDNPHAVD 60 DPEAIATMVN MAIRNSTERR KLGFFSCGTG NPIDDCWRCD RNWIRNRRRL ADCSIGFGRN 120 AVGGRDGRFY VVTDPNDYDA VNPRPGTLRH AVIQDRPLWI VFKRDMVITL KQELIMNSFK 180 TIDARGANVH IAGGACITIQ YVTNIIIHGL HIHDCRRTGN AMVRASPSHY GWRTMADGDG 240 ISIFGASHIW IDHNSLSSCA DGLIDAIMGS TAITISNNFF THHNEVILLG HSDSYTRDRA 300 MQVTIAYNHF GEGLIQRMPR CRHGYFHVVN NDYTHWEMYA IGGSANPTIN SQGNRYLAPY 360 NPFAKQVTHR VVGKGIWRHW NWRSEGDLML NGAFFIPSGR GAAANYARAS SLAAKSSSMV 420 GTLTSGAGAL GCRRGAQC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 2.0e-25 | 178 | 354 | 189 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 6.0e-70 | 171 | 356 | 208 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 2.0e-79 | 165 | 359 | 206 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ADD62392.1 | 0 | 36 | 438 | 39 | 445 | pectase lyase [Prunus persica] |
EMBL | CAN75298.1 | 0 | 28 | 438 | 31 | 445 | hypothetical protein [Vitis vinifera] |
EMBL | CBI33346.1 | 0 | 36 | 438 | 32 | 430 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265100.1 | 0 | 1 | 438 | 1 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285639.1 | 0 | 36 | 438 | 34 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 91 | 430 | 2 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 91 | 430 | 2 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 7e-16 | 160 | 358 | 50 | 248 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1vbl_A | 0.00000000000004 | 186 | 333 | 140 | 301 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1bn8_A | 0.000000000003 | 181 | 333 | 151 | 316 | A Chain A, Bacillus Subtilis Pectate Lyase |