Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a007094m |
Family | PL1 |
Protein Properties | Length: 420 Molecular Weight: 46299.1 Isoelectric Point: 7.5517 |
Chromosome | Chromosome/Scaffold: 1 Start: 2487677 End: 2491149 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 132 | 338 | 0 |
IQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVIVHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGASHVWID HNSLSGCSDGLIDAIMGSTAITISNNYFTQHNEVMLLGHSDSNTRDKVMQVTVAYNHFGEGLTQRMPRCRHGYFHVVNNDYTSWEMYAIGGSANPTINSQ GNRFLAS |
Full Sequence |
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Protein Sequence Length: 420 Download |
MAVSLRIIAL CAFLTAMMFA VRSERLDESG ELKHEHAEDD PEAIAAMVES NIRNSTERRK 60 LGFLSCGTGN PIDDCWRCDR NWIRNRKRLA DCAIGFGRNA VGGRDGRYYV VTDPSDDDAV 120 NPRPGTLRHA VIQDRPLWIV FKRDMVITLK QELIMNSFKT IDGRGANVHI ANGACITIQY 180 VTNVIVHGLH IHDCKPTGNA MVRSSPSHYG WRTMADGDGI SIFGASHVWI DHNSLSGCSD 240 GLIDAIMGST AITISNNYFT QHNEVMLLGH SDSNTRDKVM QVTVAYNHFG EGLTQRMPRC 300 RHGYFHVVNN DYTSWEMYAI GGSANPTINS QGNRFLASNN QFTKEVTKRI VNSDDNQWKE 360 WNWRSEGDLL LNGAYFTPSG GGASASYARA SSLAAKPSSL VSTLTSDAGV LNCRKGVQC* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 1.0e-28 | 157 | 335 | 191 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 4.0e-74 | 150 | 335 | 208 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 3.0e-83 | 144 | 339 | 207 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN75298.1 | 0 | 5 | 419 | 30 | 445 | hypothetical protein [Vitis vinifera] |
EMBL | CBI33346.1 | 0 | 33 | 419 | 45 | 430 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_567409.1 | 0 | 4 | 419 | 52 | 470 | pectate lyase family protein [Arabidopsis thaliana] |
RefSeq | XP_002265100.1 | 0 | 5 | 419 | 30 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285639.1 | 0 | 33 | 419 | 47 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 70 | 411 | 2 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 70 | 411 | 2 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 7e-16 | 139 | 337 | 50 | 248 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1pe9_B | 0.000000000000001 | 160 | 409 | 90 | 357 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1pe9_A | 0.000000000000001 | 160 | 409 | 90 | 357 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |