| Basic Information | |
|---|---|
| Species | Mimulus guttatus |
| Cazyme ID | mgv1a011768m |
| Family | GH19 |
| Protein Properties | Length: 272 Molecular Weight: 29053.3 Isoelectric Point: 8.1182 |
| Chromosome | Chromosome/Scaffold: 14 Start: 723520 End: 725417 |
| Description | homolog of carrot EP3-3 chitinase |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH19 | 67 | 271 | 0 |
| RVSDIVTDAFFNGIINQSPSGCPGRTFYTRSAFLQAAGSYPNFGTAGSADDSRREIAAFFAHVTHETGHMCSRVETGGQSRNYCDSSNTQYPCAPNKGYY GRGPLQLSWNYNYGPAGQSIGFDGLNNPEIVARDPVISFKTALWFWMRTCHGPITTGQGFGATIRAINGNLECNGANSGTVTARVNYYRDYCGQFRVDPG TNLRC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 272 Download |
| MKSPQPIYIL FALLLATGKW VSGQNCGCAS NLCCSQFGYC GTGNDYCGTG CRSGPCFGSS 60 GGNNGVRVSD IVTDAFFNGI INQSPSGCPG RTFYTRSAFL QAAGSYPNFG TAGSADDSRR 120 EIAAFFAHVT HETGHMCSRV ETGGQSRNYC DSSNTQYPCA PNKGYYGRGP LQLSWNYNYG 180 PAGQSIGFDG LNNPEIVARD PVISFKTALW FWMRTCHGPI TTGQGFGATI RAINGNLECN 240 GANSGTVTAR VNYYRDYCGQ FRVDPGTNLR C* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00187 | Chitin_bind_1 | 2.0e-7 | 28 | 53 | 26 | + Chitin recognition protein. | ||
| smart00270 | ChtBD1 | 1.0e-7 | 28 | 54 | 27 | + Chitin binding domain. | ||
| cd00442 | lysozyme_like | 2.0e-8 | 158 | 213 | 56 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
| pfam00182 | Glyco_hydro_19 | 4.0e-94 | 71 | 271 | 233 | + Chitinase class I. | ||
| cd00325 | chitinase_glyco_hydro_19 | 1.0e-100 | 72 | 271 | 230 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004568 | chitinase activity |
| GO:0006032 | chitin catabolic process |
| GO:0008061 | chitin binding |
| GO:0016998 | cell wall macromolecule catabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACX94236.1 | 0 | 1 | 271 | 1 | 267 | chitinase [Lactuca sativa] |
| DDBJ | BAF44533.1 | 0 | 24 | 271 | 29 | 276 | class IV chitinase [Nicotiana tabacum] |
| EMBL | CAA87072.1 | 0 | 12 | 271 | 4 | 261 | pathogenesis-related protein PR-3 type [Sambucus nigra] |
| RefSeq | XP_002326039.1 | 0 | 9 | 271 | 1 | 258 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326040.1 | 0 | 7 | 271 | 6 | 270 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hbh_A | 0 | 68 | 271 | 2 | 204 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus Mutant H210a |
| PDB | 3hbe_X | 0 | 68 | 271 | 2 | 204 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus Mutant H210a |
| PDB | 3hbd_A | 0 | 68 | 271 | 2 | 204 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
| PDB | 2z38_A | 0 | 71 | 271 | 9 | 240 | A Chain A, Crystal Structure Of Chloride Bound Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| PDB | 2z37_D | 0 | 71 | 271 | 6 | 237 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
