Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a011822m |
Family | CE8 |
Protein Properties | Length: 270 Molecular Weight: 29939.7 Isoelectric Point: 7.1611 |
Chromosome | Chromosome/Scaffold: 40 Start: 921713 End: 924097 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 5 | 261 | 0 |
DRVVINVHAGIYTEKVTIPPTKSYITIQGAGAENTVVQWGDMAKNTNGTFYSATFAVNSPFFIARNITFKNTAPVPPPGAKDMQAVALRISADAATFVGC KFLGAQDTLFDHEGRHYYKDCYIQGSIDFIFGDGRSFFENCELHSIPPGGALTAQHRDSESDDSGFVFVNCRVTGSAAVYLGRAWGSYSRVVFAYTYMHS IIIPRGWHDWGRKSRDSTVFYGQYKCSGPGAKFAKRVEWAKELTDEEARPFIYPDFV |
Full Sequence |
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Protein Sequence Length: 270 Download |
MVNLDRVVIN VHAGIYTEKV TIPPTKSYIT IQGAGAENTV VQWGDMAKNT NGTFYSATFA 60 VNSPFFIARN ITFKNTAPVP PPGAKDMQAV ALRISADAAT FVGCKFLGAQ DTLFDHEGRH 120 YYKDCYIQGS IDFIFGDGRS FFENCELHSI PPGGALTAQH RDSESDDSGF VFVNCRVTGS 180 AAVYLGRAWG SYSRVVFAYT YMHSIIIPRG WHDWGRKSRD STVFYGQYKC SGPGAKFAKR 240 VEWAKELTDE EARPFIYPDF VDASQWLNI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 1.0e-101 | 3 | 267 | 273 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 5.0e-107 | 3 | 267 | 266 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-108 | 3 | 267 | 268 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 2.0e-116 | 6 | 267 | 271 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 7.0e-169 | 2 | 267 | 273 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 2 | 269 | 105 | 379 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27989.1 | 0 | 2 | 269 | 39 | 313 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002330522.1 | 0 | 2 | 269 | 107 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002440102.1 | 0 | 1 | 269 | 131 | 406 | hypothetical protein SORBIDRAFT_09g026060 [Sorghum bicolor] |
RefSeq | XP_002514210.1 | 0 | 2 | 269 | 109 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 6 | 267 | 36 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.96182e-44 | 6 | 267 | 32 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 4e-27 | 8 | 260 | 62 | 361 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 1e-19 | 8 | 255 | 36 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 1e-19 | 8 | 255 | 36 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR152847 | 249 | 1 | 249 | 0 |
GR152848 | 222 | 49 | 270 | 0 |
DT759916 | 272 | 6 | 270 | 0 |
EH701256 | 253 | 1 | 246 | 0 |
EY182830 | 239 | 39 | 270 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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