Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a018528m |
Family | CE8 |
Protein Properties | Length: 321 Molecular Weight: 34904 Isoelectric Point: 4.6602 |
Chromosome | Chromosome/Scaffold: 40 Start: 894032 End: 899880 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 45 | 312 | 0 |
ITVDKNPGSGDFTSIQAAIDSLPLVNQDKVLIDVHEGIYIEKVIIPSTKAYIKIQGAGAENTVVQWGDTASSQPSGTYGSATFGIDAPYFVAKNITFKVL LAGDASAFAGCKILGAQDTLLDQNGRHYYEDCYIEGSVDFICGEARSYFKGCELHAIATGAVTAQKRNSSLDNNGFSLVNCRVTGSDLVYLGRAWGRFST TIFAYTYMDSNVIPEGWFDWADPSRQSTVTFGEYQCSGPGSNTAGRVKWSKILTDEEAGRFISLDFID |
Full Sequence |
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Protein Sequence Length: 321 Download |
MPSHQQTVSH REESEEALKA SLNPLEIRER QSRNKVITAA PSIIITVDKN PGSGDFTSIQ 60 AAIDSLPLVN QDKVLIDVHE GIYIEKVIIP STKAYIKIQG AGAENTVVQW GDTASSQPSG 120 TYGSATFGID APYFVAKNIT FKVLLAGDAS AFAGCKILGA QDTLLDQNGR HYYEDCYIEG 180 SVDFICGEAR SYFKGCELHA IATGAVTAQK RNSSLDNNGF SLVNCRVTGS DLVYLGRAWG 240 RFSTTIFAYT YMDSNVIPEG WFDWADPSRQ STVTFGEYQC SGPGSNTAGR VKWSKILTDE 300 EAGRFISLDF IDASEWLDLS * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 5.0e-92 | 44 | 317 | 301 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-93 | 42 | 319 | 303 | + pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-96 | 39 | 317 | 300 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 4.0e-102 | 37 | 317 | 294 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-154 | 41 | 319 | 303 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 30 | 319 | 69 | 379 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27989.1 | 0 | 30 | 319 | 3 | 313 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002330522.1 | 0 | 30 | 319 | 71 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002440102.1 | 0 | 32 | 319 | 93 | 406 | hypothetical protein SORBIDRAFT_09g026060 [Sorghum bicolor] |
RefSeq | XP_002514210.1 | 0 | 30 | 319 | 73 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.99993e-41 | 38 | 317 | 4 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 9e-33 | 52 | 317 | 11 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.000000000000008 | 47 | 285 | 35 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000001 | 56 | 305 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000001 | 56 | 305 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT759916 | 271 | 73 | 319 | 0 |
EH701256 | 258 | 62 | 295 | 0 |
GR152847 | 250 | 68 | 299 | 0 |
EY182830 | 238 | 106 | 319 | 0 |
EE105585 | 249 | 60 | 284 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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