Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a019910m |
Family | CE8 |
Protein Properties | Length: 354 Molecular Weight: 39489.4 Isoelectric Point: 9.292 |
Chromosome | Chromosome/Scaffold: 1 Start: 4674828 End: 4677124 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 54 | 339 | 0 |
ITVSQDGRGDFTTIGEAIHTIPFYNTRRVVLRINSGVYREKVNIPRTMRFVTLVGNGSVPPTITGNDTASTVGGRTFQSATVAVDADYFMAINVKFENTA PHVVGTVGGQAVALRISGTKAAFYNCSFYGSQDTLYDHKGLHYFSNCFIQGSVDFIFGYGTSLYENCYLNSVTKKVASVTAQKRSNSSISSGFSFKNCTV SGSGSIYLGRAWGDYSRVVFSYTYMDKVVLSQGWSDWGKTSRDQKVYYGEYKCDGAGAKLTGRVPWVRVLTDEEALPFIGTYFIDG |
Full Sequence |
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Protein Sequence Length: 354 Download |
TEDYNTWVSW HVKNYKKKSL HNLKKPDYYS TKVPMTSYSS DWKLRTAEMN RMEITVSQDG 60 RGDFTTIGEA IHTIPFYNTR RVVLRINSGV YREKVNIPRT MRFVTLVGNG SVPPTITGND 120 TASTVGGRTF QSATVAVDAD YFMAINVKFE NTAPHVVGTV GGQAVALRIS GTKAAFYNCS 180 FYGSQDTLYD HKGLHYFSNC FIQGSVDFIF GYGTSLYENC YLNSVTKKVA SVTAQKRSNS 240 SISSGFSFKN CTVSGSGSIY LGRAWGDYSR VVFSYTYMDK VVLSQGWSDW GKTSRDQKVY 300 YGEYKCDGAG AKLTGRVPWV RVLTDEEALP FIGTYFIDGD TWLINPSSYH ITS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 1.0e-93 | 54 | 343 | 297 | + pectinesterase | ||
PLN02432 | PLN02432 | 2.0e-95 | 54 | 343 | 290 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 2.0e-99 | 54 | 343 | 299 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-119 | 41 | 349 | 312 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 1.0e-130 | 54 | 345 | 299 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79461.1 | 0 | 3 | 346 | 35 | 381 | hypothetical protein [Vitis vinifera] |
GenBank | EEC69509.1 | 0 | 41 | 346 | 96 | 411 | hypothetical protein OsI_38743 [Oryza sativa Indica Group] |
RefSeq | NP_001067039.1 | 0 | 41 | 346 | 95 | 410 | Os12g0563700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002320279.1 | 0 | 62 | 343 | 1 | 287 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330522.1 | 0 | 54 | 343 | 84 | 379 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 54 | 343 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 56 | 343 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 6e-17 | 57 | 331 | 12 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 6e-17 | 57 | 331 | 12 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 8e-17 | 57 | 331 | 12 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT739130 | 256 | 90 | 339 | 0 |
DR950467 | 272 | 2 | 267 | 0 |
DT740801 | 230 | 108 | 331 | 0 |
DT762805 | 212 | 128 | 339 | 0 |
EX338507 | 240 | 116 | 348 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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