y
Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a020099m |
Family | GH14 |
Protein Properties | Length: 543 Molecular Weight: 60542.5 Isoelectric Point: 8.0644 |
Chromosome | Chromosome/Scaffold: 516 Start: 7549 End: 9869 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 92 | 495 | 0 |
FVMLPLDTVSIGGSLNKSRAMFASLMALKSGGVEGVMVDAWWGLVEKDGPMKYNWEGYAELIKMVEKLGLKIQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDKSGRRNPEYISLGCDSLPVLRGRTPIQVYSDFMMSFRERFKAYLGEVVVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMR ASLAAAAEAIGKDDWGRGGPHDAGQYNQFPDDTGFFRKDGTWNSEYGHFFLEWYSGNLINHGEKILAAAERVFEGTGAKLSGKVAGIHWHYKTRSHAAEL TAGYYNTRHRDGYLPIARMLSKPQDGEQPNEANCSPEGLVKQVKMATKTARIDLAGENALERYDGGAYSQVLETSRSDSGNGLSAFTYLRLNKRLFEPEN WRNL |
Full Sequence |
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Protein Sequence Length: 543 Download |
MALALHSSTP LINLKENRSY RNPDDSSSTV GFAKMKPTCQ LRAKNSTQES QISRTERERS 60 FSTTIHELQR EKLHGMASPH SHSSTNVRVP VFVMLPLDTV SIGGSLNKSR AMFASLMALK 120 SGGVEGVMVD AWWGLVEKDG PMKYNWEGYA ELIKMVEKLG LKIQVVMSFH QCGGNVGDSC 180 SIPLPPWVLE EISKNPDLVY TDKSGRRNPE YISLGCDSLP VLRGRTPIQV YSDFMMSFRE 240 RFKAYLGEVV VEIQVGMGPC GELRYPSYPE SNGTWRFPGI GEFQCYDKYM RASLAAAAEA 300 IGKDDWGRGG PHDAGQYNQF PDDTGFFRKD GTWNSEYGHF FLEWYSGNLI NHGEKILAAA 360 ERVFEGTGAK LSGKVAGIHW HYKTRSHAAE LTAGYYNTRH RDGYLPIARM LSKPQDGEQP 420 NEANCSPEGL VKQVKMATKT ARIDLAGENA LERYDGGAYS QVLETSRSDS GNGLSAFTYL 480 RLNKRLFEPE NWRNLVEFVR SMSEGGQRTR LPESDRIGTD LFVGFVKQSN VRKTISEVAL 540 VL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 7.0e-140 | 53 | 503 | 473 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 8.0e-159 | 92 | 498 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02801 | PLN02801 | 1.0e-172 | 89 | 502 | 433 | + beta-amylase | ||
PLN02803 | PLN02803 | 0 | 1 | 541 | 554 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 89 | 513 | 442 | + beta-amylase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK84008.1 | 0 | 1 | 541 | 1 | 545 | AF393847_1 beta-amylase PCT-BMYI [Solanum tuberosum] |
RefSeq | XP_002282871.1 | 0 | 1 | 541 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 541 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 541 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 541 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1q6g_A | 0 | 89 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1wdq_A | 0 | 89 | 502 | 12 | 441 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1ukp_D | 0 | 89 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 89 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_B | 0 | 89 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103692 | 456 | 89 | 533 | 0 |
HO794833 | 415 | 127 | 530 | 0 |
HO781538 | 410 | 28 | 425 | 0 |
HO825836 | 392 | 163 | 543 | 0 |
GR063881 | 263 | 41 | 303 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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