Basic Information | |
---|---|
Species | Mimulus guttatus |
Cazyme ID | mgv1a022744m |
Family | CE8 |
Protein Properties | Length: 302 Molecular Weight: 32957.8 Isoelectric Point: 5.9551 |
Chromosome | Chromosome/Scaffold: 40 Start: 806920 End: 810221 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 7 | 293 | 0 |
IVDKNPGSGNFTSIQGAIDSLPLVNQERVLIDVHAGIYTEKVTIPSTKAYIKIQGAGAENTVVQWGDTARSQPLGTYGSATFGVDAPYFVAKNITFKHTS FKIKIQRYHFATDKRVALRISGDASAFAGCKFLGAQDTLYDHKGRHYYEDCYIEGSVDFIFGDGRSYFKGCELHAIATGAVAAQNRSASSENTGFSLVNC KVTGSDIVYLGRAWAPFSTTVFAYTYMENNVNPEGWFDWNDPSRQSTVTFGEYQCSGPGSNTAGRVKWSKILTDEEAGRFTSLDFID |
Full Sequence |
---|
Protein Sequence Length: 302 Download |
APSIIIIVDK NPGSGNFTSI QGAIDSLPLV NQERVLIDVH AGIYTEKVTI PSTKAYIKIQ 60 GAGAENTVVQ WGDTARSQPL GTYGSATFGV DAPYFVAKNI TFKHTSFKIK IQRYHFATDK 120 RVALRISGDA SAFAGCKFLG AQDTLYDHKG RHYYEDCYIE GSVDFIFGDG RSYFKGCELH 180 AIATGAVAAQ NRSASSENTG FSLVNCKVTG SDIVYLGRAW APFSTTVFAY TYMENNVNPE 240 GWFDWNDPSR QSTVTFGEYQ CSGPGSNTAG RVKWSKILTD EEAGRFTSLD FIDASEWLDL 300 S* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 6.0e-97 | 3 | 300 | 307 | + pectinesterase | ||
PLN02432 | PLN02432 | 6.0e-102 | 1 | 298 | 301 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 5.0e-102 | 5 | 298 | 304 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 6.0e-110 | 5 | 298 | 298 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 8.0e-168 | 2 | 300 | 306 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 2 | 300 | 77 | 379 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27989.1 | 0 | 2 | 300 | 11 | 313 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002330522.1 | 0 | 2 | 300 | 79 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002440102.1 | 0 | 2 | 300 | 104 | 406 | hypothetical protein SORBIDRAFT_09g026060 [Sorghum bicolor] |
RefSeq | XP_002514210.1 | 0 | 2 | 300 | 81 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 2 | 298 | 7 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 5.00264e-43 | 13 | 298 | 11 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 1e-20 | 7 | 229 | 34 | 276 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 1e-19 | 7 | 287 | 7 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 1e-19 | 7 | 287 | 7 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EH701256 | 261 | 23 | 276 | 0 |
DT759916 | 274 | 34 | 300 | 0 |
EE105585 | 252 | 21 | 265 | 0 |
GR152847 | 253 | 29 | 280 | 0 |
EY182830 | 241 | 67 | 300 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|