Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a024427m |
Family | GH10 |
Protein Properties | Length: 485 Molecular Weight: 55078.9 Isoelectric Point: 7.47 |
Chromosome | Chromosome/Scaffold: 1052 Start: 1988 End: 5472 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 190 | 451 | 0 |
QNSANFPFGTAINQNILQNGAYQNWFFSRFKYTVFENELKWAETEHNRGVVDYSVPDALINLAKSHGVTIRGHNVLWDSPKYQPRWVPGLSSNDLAAAAQ KRLISVMTKYKGRFIHWDVVNENMHWNFFESRLGPNISTVYYKYANKIDGSRTTPFLNEFHTIEESSDGVASPSKYLQKIDEMRRGRYAGPLGIGAQGHF NNVNLPYTRSAIDMLASAKLPLWVTELDVKAGPNQANYLNQVLREIHSHYAVQGIMMWTGWS |
Full Sequence |
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Protein Sequence Length: 485 Download |
MCLAKPLKPQ YEGGVIVNPE LNEGLKGWTR FEDSTVEHRE SDDGNKYIVA SARKQPFHSF 60 SQKFNLEKEK LYTFSAWLQV SNEDAYIAAI FKTNTSNVYA GWITAHKGCW SMVKGGLVVN 120 VSGPAELYFE SNNTNVDIWA DSISLQPFTN EEWKSHQDQS VEKFRKSKVK FQAVDQHGQP 180 IPNATVSIKQ NSANFPFGTA INQNILQNGA YQNWFFSRFK YTVFENELKW AETEHNRGVV 240 DYSVPDALIN LAKSHGVTIR GHNVLWDSPK YQPRWVPGLS SNDLAAAAQK RLISVMTKYK 300 GRFIHWDVVN ENMHWNFFES RLGPNISTVY YKYANKIDGS RTTPFLNEFH TIEESSDGVA 360 SPSKYLQKID EMRRGRYAGP LGIGAQGHFN NVNLPYTRSA IDMLASAKLP LWVTELDVKA 420 GPNQANYLNQ VLREIHSHYA VQGIMMWTGW SPQGCFAMCL TDNNFRNLET GNVVDSFINE 480 LTHAD |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 0.004 | 22 | 131 | 120 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 8.0e-24 | 225 | 418 | 205 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 1.0e-39 | 192 | 451 | 285 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 9.0e-56 | 228 | 474 | 271 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI22450.1 | 0 | 1 | 482 | 590 | 1070 | unnamed protein product [Vitis vinifera] |
EMBL | CBI22450.1 | 0 | 2 | 484 | 57 | 536 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264556.1 | 0 | 2 | 484 | 120 | 599 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313180.1 | 0 | 2 | 480 | 3 | 482 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532418.1 | 0 | 2 | 480 | 31 | 509 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 3e-23 | 197 | 465 | 18 | 288 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1i1w_A | 3e-23 | 197 | 465 | 18 | 288 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1nq6_A | 4e-23 | 197 | 447 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 2bnj_A | 7e-23 | 197 | 465 | 18 | 288 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1gor_A | 7e-23 | 197 | 465 | 18 | 288 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR150167 | 263 | 5 | 267 | 0 |
GR160803 | 262 | 38 | 299 | 0 |
GR188156 | 245 | 153 | 397 | 0 |
GR153812 | 211 | 2 | 212 | 0 |
GR166465 | 192 | 2 | 193 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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