Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a024695m |
Family | CE8 |
Protein Properties | Length: 354 Molecular Weight: 38827.1 Isoelectric Point: 9.0548 |
Chromosome | Chromosome/Scaffold: 30 Start: 1757933 End: 1760599 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 67 | 347 | 0 |
VDRNPQLGDFTSIQDAIDSLPLVNLVRVVIKIHAGVYTEKVTIPTMKSFITIEGASAEKTVVQFGIPLGTYGSATFAVNSPYFIARNITFKNTTPVPPPG AVGKQAVAFRISADTAAFVGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFENCQVHAIAPIIGAVTAQARSSILDDSGFSFVNCKVTGSGA LYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPSREMTVFYGQYKCTGAGANYAGRVSWSRELTDQEAKPFISLTFIDG |
Full Sequence |
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Protein Sequence Length: 354 Download |
MNNSGSVRCR TKGMRPRKSG NSSSVDTTQV EQSEQQFLKW VDFVGSLKHS RFKTAKNKVF 60 PSYTLTVDRN PQLGDFTSIQ DAIDSLPLVN LVRVVIKIHA GVYTEKVTIP TMKSFITIEG 120 ASAEKTVVQF GIPLGTYGSA TFAVNSPYFI ARNITFKNTT PVPPPGAVGK QAVAFRISAD 180 TAAFVGCKFL GAQDTLYDHL GRHYYKDCYI EGSVDFIFGN GLSLFENCQV HAIAPIIGAV 240 TAQARSSILD DSGFSFVNCK VTGSGALYLG RAWGPFSRVV FAYTYMDNII IPKGWYNWGD 300 PSREMTVFYG QYKCTGAGAN YAGRVSWSRE LTDQEAKPFI SLTFIDGSEW INV* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 3.0e-109 | 22 | 351 | 341 | + probable pectinesterase | ||
PLN02304 | PLN02304 | 1.0e-111 | 64 | 351 | 300 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-112 | 61 | 351 | 291 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-124 | 74 | 351 | 283 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 0 | 20 | 351 | 342 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 3 | 353 | 18 | 379 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27989.1 | 0 | 52 | 353 | 2 | 313 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197474.1 | 0 | 4 | 353 | 23 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330522.1 | 0 | 3 | 353 | 20 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 1 | 353 | 18 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 74 | 351 | 17 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3.00018e-42 | 74 | 351 | 13 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-28 | 63 | 346 | 31 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 3e-21 | 76 | 339 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 3e-21 | 76 | 339 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH701256 | 260 | 81 | 330 | 0 |
DT759916 | 273 | 92 | 354 | 0 |
EY182830 | 222 | 133 | 354 | 0 |
ES913245 | 276 | 34 | 299 | 0 |
EE105585 | 249 | 80 | 318 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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