Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a025297m |
Family | CE8 |
Protein Properties | Length: 305 Molecular Weight: 33515.4 Isoelectric Point: 5.948 |
Chromosome | Chromosome/Scaffold: 29 Start: 192694 End: 196218 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 292 | 0 |
SVDPSSGTSFSTIQSAIDSVPSNNHNWISIYIKAGVYNEQVKIPPDKGFIRLNGEGMGKTSVVWGAHDTMLTSSTFESMADNIVVSGITFVNSYNYPPST NKNPVKPAVAAKISGDKSAFYECGFLGYQDTLLDDAGRHYFNYCYIEGATDFIFGGGQSIYEKCSIKVNVGEKVSGSIGFIAAQARASSNDDGGFVFKQC NVTGNGKAFLARAWKPYSRVIYYNSFLSEIVVPQGWDAWNYVGHENQITFADDQCQGPGSDKSNRVKWEKNLSPEELQLFTSNSYID |
Full Sequence |
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Protein Sequence Length: 305 Download |
MHRTISVDPS SGTSFSTIQS AIDSVPSNNH NWISIYIKAG VYNEQVKIPP DKGFIRLNGE 60 GMGKTSVVWG AHDTMLTSST FESMADNIVV SGITFVNSYN YPPSTNKNPV KPAVAAKISG 120 DKSAFYECGF LGYQDTLLDD AGRHYFNYCY IEGATDFIFG GGQSIYEKCS IKVNVGEKVS 180 GSIGFIAAQA RASSNDDGGF VFKQCNVTGN GKAFLARAWK PYSRVIYYNS FLSEIVVPQG 240 WDAWNYVGHE NQITFADDQC QGPGSDKSNR VKWEKNLSPE ELQLFTSNSY IDNDGWMHKI 300 PLNI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 9.0e-85 | 3 | 297 | 296 | + Probable pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-85 | 3 | 297 | 309 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-89 | 5 | 297 | 293 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 2.0e-114 | 3 | 302 | 301 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 4.0e-147 | 1 | 302 | 302 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 2 | 301 | 42 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 2 | 302 | 31 | 333 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 2 | 301 | 29 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323773.1 | 0 | 5 | 302 | 1 | 289 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 4 | 302 | 47 | 336 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-35 | 15 | 298 | 19 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-30 | 15 | 298 | 15 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 8e-20 | 5 | 286 | 35 | 353 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 1e-16 | 5 | 221 | 8 | 247 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 1e-16 | 5 | 221 | 8 | 247 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AW036464 | 210 | 65 | 274 | 0 |
DV984237 | 290 | 15 | 299 | 0 |
EX315894 | 276 | 29 | 299 | 0 |
EX317112 | 273 | 32 | 299 | 0 |
HO845758 | 173 | 4 | 176 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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