Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a025315m |
Family | CE8 |
Protein Properties | Length: 362 Molecular Weight: 40672.8 Isoelectric Point: 9.6124 |
Chromosome | Chromosome/Scaffold: 4 Start: 660970 End: 662717 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 64 | 355 | 0 |
IVVDKNGSGDSFTVQGAVDMVREHNAHRVKIHILPGVYREKVRIPRNKPYISFIGEQNRASETVITWHDKAGDRDSDAGDLGTQRSASVTVESDFFVASW ITFQNTIVARPGIIGAQAVALRIAGEKAVFYEARFLGSQDTLLDEGGTHYFYRCFIQGSTDFVFGNAKSLYQECDISVVGRGFAVAAHHRNTAAEETGFS FVNCTVRGTGVVYLGRAWGEYSRIVYSQSDFNIRVKPRGWDDWRKPSRRKTVMFGEYKCRGRGANRRRRARWSKSLSYSEARPFLDKNFING |
Full Sequence |
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Protein Sequence Length: 362 Download |
MSLCFLVILV FLLGSEAKAG FTPSNGNGST NYNYITWNDF KVDYHDHGRL LPVGDSVNLD 60 KVIIVVDKNG SGDSFTVQGA VDMVREHNAH RVKIHILPGV YREKVRIPRN KPYISFIGEQ 120 NRASETVITW HDKAGDRDSD AGDLGTQRSA SVTVESDFFV ASWITFQNTI VARPGIIGAQ 180 AVALRIAGEK AVFYEARFLG SQDTLLDEGG THYFYRCFIQ GSTDFVFGNA KSLYQECDIS 240 VVGRGFAVAA HHRNTAAEET GFSFVNCTVR GTGVVYLGRA WGEYSRIVYS QSDFNIRVKP 300 RGWDDWRKPS RRKTVMFGEY KCRGRGANRR RRARWSKSLS YSEARPFLDK NFINGDQWLR 360 L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 1.0e-96 | 62 | 360 | 300 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-97 | 63 | 359 | 302 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 1.0e-100 | 44 | 359 | 319 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-109 | 1 | 361 | 374 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 7.0e-165 | 31 | 361 | 332 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE67559.1 | 0 | 60 | 361 | 71 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
RefSeq | NP_200370.1 | 0 | 1 | 361 | 11 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002264297.1 | 0 | 2 | 361 | 9 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298857.1 | 0 | 63 | 361 | 19 | 318 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522727.1 | 0 | 33 | 361 | 57 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 9.94922e-44 | 64 | 360 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-33 | 65 | 360 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.000000000006 | 65 | 239 | 7 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.000000000006 | 65 | 239 | 7 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.000000000006 | 65 | 239 | 7 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |