Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a025431m |
Family | GH28 |
Protein Properties | Length: 395 Molecular Weight: 42318.6 Isoelectric Point: 9.6388 |
Chromosome | Chromosome/Scaffold: 97 Start: 151199 End: 153669 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH28 | 50 | 382 | 0 |
NAACNSDVPTASMVVPNGTFLVKSVTFTGPCKSDIKLLIHGTLIAPNNYRFLGSNESWIMFYSVSRLSIVGGTLNAKGSSLWSCKSVGNHCPFGARSLSF QSCNKVLVSGLKSFNSQRVHISINGCSNMILQRMKIIAPSRSPNTDGIHIGSSRNITITNSNIGTGDDCISIGQGSMKMRIDRIVCGPGHGISIGSLGSS AIENGVDGVIVTNSIFTQTQNGVRVKSWPKASDGYAKNLVFKNLTMRNVANPIIIDQDYCPTKSCTNSKNSGVKVSQVRFEQIKGTSLTQKAITLRCSST NPCQGIELKDIDLTYVNHNFKKPTLSDCENARG |
Full Sequence |
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Protein Sequence Length: 395 Download |
MSNVIPLSCK LFIVVIAIKL CTSAAHNVVD FGARGDGKTD STSSFLKAWN AACNSDVPTA 60 SMVVPNGTFL VKSVTFTGPC KSDIKLLIHG TLIAPNNYRF LGSNESWIMF YSVSRLSIVG 120 GTLNAKGSSL WSCKSVGNHC PFGARSLSFQ SCNKVLVSGL KSFNSQRVHI SINGCSNMIL 180 QRMKIIAPSR SPNTDGIHIG SSRNITITNS NIGTGDDCIS IGQGSMKMRI DRIVCGPGHG 240 ISIGSLGSSA IENGVDGVIV TNSIFTQTQN GVRVKSWPKA SDGYAKNLVF KNLTMRNVAN 300 PIIIDQDYCP TKSCTNSKNS GVKVSQVRFE QIKGTSLTQK AITLRCSSTN PCQGIELKDI 360 DLTYVNHNFK KPTLSDCENA RGFCTGFVYP KNCL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03010 | PLN03010 | 6.0e-79 | 7 | 382 | 381 | + polygalacturonase | ||
PLN02218 | PLN02218 | 1.0e-79 | 20 | 391 | 378 | + polygalacturonase ADPG | ||
PLN02793 | PLN02793 | 1.0e-88 | 28 | 394 | 374 | + Probable polygalacturonase | ||
PLN02188 | PLN02188 | 2.0e-94 | 27 | 393 | 375 | + polygalacturonase/glycoside hydrolase family protein | ||
PLN02155 | PLN02155 | 3.0e-124 | 11 | 394 | 386 | + polygalacturonase |
Gene Ontology | |
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GO Term | Description |
GO:0004650 | polygalacturonase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_172056.1 | 0 | 11 | 394 | 11 | 392 | polygalacturonase, putative / pectinase, putative [Arabidopsis thaliana] |
RefSeq | NP_181917.1 | 0 | 11 | 394 | 13 | 392 | polygalacturonase, putative / pectinase, putative [Arabidopsis thaliana] |
RefSeq | XP_002275740.1 | 0 | 11 | 394 | 12 | 389 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331632.1 | 0 | 1 | 394 | 1 | 391 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331634.1 | 0 | 23 | 394 | 24 | 390 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1bhe_A | 1e-16 | 163 | 363 | 170 | 362 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1hg8_A | 2e-16 | 193 | 335 | 165 | 304 | A Chain A, Endopolygalacturonase From The Phytopathogenic Fungus Fusarium Moniliforme |
PDB | 1ib4_B | 6e-16 | 60 | 363 | 28 | 322 | A Chain A, Endopolygalacturonase From The Phytopathogenic Fungus Fusarium Moniliforme |
PDB | 1ib4_A | 6e-16 | 60 | 363 | 28 | 322 | A Chain A, Endopolygalacturonase From The Phytopathogenic Fungus Fusarium Moniliforme |
PDB | 1ia5_A | 6e-16 | 60 | 363 | 28 | 322 | A Chain A, Polygalacturonase From Aspergillus Aculeatus |