Basic Information | |
---|---|
Species | Mimulus guttatus |
Cazyme ID | mgv1a025960m |
Family | CE8 |
Protein Properties | Length: 305 Molecular Weight: 32821.5 Isoelectric Point: 4.7217 |
Chromosome | Chromosome/Scaffold: 40 Start: 874534 End: 877142 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 12 | 296 | 0 |
ITVDKNPGSGNFTSIQGAIDSLPLVNQERVLIDVHAGIYTEKVTIPSTKAYIKIQGAGAENTVVQWGDTARSQPLGTYGSATFGVDAPYFVAKNITFKNT APIPPPGADGMQGVALRISGDASAFAGCKFLGAQDTLYDHRGRHYYEDCYIEGSVDFIFGDGRSYYKGCELHAIATGAVAAQNRSASSENTGFSIVNCRV TGSDIVYLARAWAPFSTTIFAYTYMENNVNPEGWFDWGDPSRQSTVTFGEYQCSGPGSNTAGRVKWSKILTDEEAGRFTSLDFID |
Full Sequence |
---|
Protein Sequence Length: 305 Download |
NKVIMTAPSI IITVDKNPGS GNFTSIQGAI DSLPLVNQER VLIDVHAGIY TEKVTIPSTK 60 AYIKIQGAGA ENTVVQWGDT ARSQPLGTYG SATFGVDAPY FVAKNITFKN TAPIPPPGAD 120 GMQGVALRIS GDASAFAGCK FLGAQDTLYD HRGRHYYEDC YIEGSVDFIF GDGRSYYKGC 180 ELHAIATGAV AAQNRSASSE NTGFSIVNCR VTGSDIVYLA RAWAPFSTTI FAYTYMENNV 240 NPEGWFDWGD PSRQSTVTFG EYQCSGPGSN TAGRVKWSKI LTDEEAGRFT SLDFIDASEW 300 LDLS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 4.0e-102 | 9 | 303 | 304 | + pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-103 | 11 | 301 | 299 | + probable pectinesterase | ||
PLN02304 | PLN02304 | 2.0e-112 | 11 | 301 | 301 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 9.0e-116 | 11 | 301 | 295 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 3.0e-180 | 8 | 303 | 303 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 8 | 303 | 77 | 379 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27989.1 | 0 | 8 | 303 | 11 | 313 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002330522.1 | 0 | 1 | 303 | 75 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002440102.1 | 0 | 8 | 303 | 104 | 406 | hypothetical protein SORBIDRAFT_09g026060 [Sorghum bicolor] |
RefSeq | XP_002514210.1 | 0 | 8 | 303 | 81 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 8 | 301 | 7 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.00053e-42 | 19 | 301 | 11 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-21 | 23 | 290 | 18 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-21 | 23 | 290 | 18 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-21 | 23 | 290 | 18 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DT759916 | 271 | 40 | 303 | 0 |
EH701256 | 258 | 29 | 279 | 0 |
GR152847 | 250 | 35 | 283 | 0 |
EE105585 | 249 | 27 | 268 | 0 |
EY182830 | 238 | 73 | 303 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|