Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a026362m |
Family | AA7 |
Protein Properties | Length: 533 Molecular Weight: 59917.6 Isoelectric Point: 8.7473 |
Chromosome | Chromosome/Scaffold: 12 Start: 1802657 End: 1804255 |
Description | FAD-binding Berberine family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 69 | 526 | 0 |
FINTTNTPKPTLILTPFQESQVQAIVNCAKNVNLHLKIRSGGHDYEGLSYMCKAPFAILDMFNLRSIQVNMKDETAWVQAGSTLGELYHKIWENSKVHGF PSGVCPTVGVGGHISGGGYGTMIRKYGLSVDHVVDARIVVANGSILDRASMGEDLFWAIRGGGGASFGVVLSYKINLVPVPEIVTVFRVPRTLEQNAVDL VYRWQNIAPQLENELFIRVYIQTVNTTGNSKITLRTSFIAMYLGDSDKLVSIMNKKFPELGLKKEDCKEMSWIKSILFWGEFPDTAIESDLLSRKALVTS AFKMKSDYVKTPISRGDLGRIYQKLISSGNIWMAMNAYGGMMSEVADTETAFPHRVGNIYKIQYLTYWNETGPDSDKANIQSIRNFYDFMTPFVSKNPRE AFLNYRDIDIGSTDNVGPNAYSEARVYGEKYFKGNFDRLVQVKTKVDPTNFFRNEQSI |
Full Sequence |
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Protein Sequence Length: 533 Download |
MRIISFSLTI LQLLLLSSFF SSIATSQDNF FKCLSSNNIG DDDLPKITYM QSNINYTNIL 60 QEYIRNGRFI NTTNTPKPTL ILTPFQESQV QAIVNCAKNV NLHLKIRSGG HDYEGLSYMC 120 KAPFAILDMF NLRSIQVNMK DETAWVQAGS TLGELYHKIW ENSKVHGFPS GVCPTVGVGG 180 HISGGGYGTM IRKYGLSVDH VVDARIVVAN GSILDRASMG EDLFWAIRGG GGASFGVVLS 240 YKINLVPVPE IVTVFRVPRT LEQNAVDLVY RWQNIAPQLE NELFIRVYIQ TVNTTGNSKI 300 TLRTSFIAMY LGDSDKLVSI MNKKFPELGL KKEDCKEMSW IKSILFWGEF PDTAIESDLL 360 SRKALVTSAF KMKSDYVKTP ISRGDLGRIY QKLISSGNIW MAMNAYGGMM SEVADTETAF 420 PHRVGNIYKI QYLTYWNETG PDSDKANIQS IRNFYDFMTP FVSKNPREAF LNYRDIDIGS 480 TDNVGPNAYS EARVYGEKYF KGNFDRLVQV KTKVDPTNFF RNEQSIPVLI KN* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01565 | FAD_binding_4 | 1.0e-17 | 78 | 215 | 139 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
pfam08031 | BBE | 1.0e-17 | 469 | 527 | 59 | + Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine. | ||
COG0277 | GlcD | 7.0e-19 | 78 | 529 | 466 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] |
Gene Ontology | |
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GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81650.1 | 0 | 28 | 529 | 36 | 531 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002267223.1 | 0 | 28 | 529 | 36 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268606.1 | 0 | 28 | 529 | 36 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002269643.1 | 0 | 28 | 529 | 32 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270139.1 | 0 | 28 | 529 | 29 | 530 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vte_A | 0 | 24 | 529 | 1 | 513 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
PDB | 4dns_B | 0 | 27 | 530 | 10 | 497 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 4dns_A | 0 | 27 | 530 | 10 | 497 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3tsj_B | 0 | 19 | 532 | 1 | 499 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3tsj_A | 0 | 19 | 532 | 1 | 499 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |