Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna00123.1-v1.0-hybrid |
Family | GT1 |
Protein Properties | Length: 1752 Molecular Weight: 193743 Isoelectric Point: 8.4006 |
Chromosome | Chromosome/Scaffold: 3 Start: 5797219 End: 5812464 |
Description | multidrug resistance-associated protein 13 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 1604 | 1726 | 9.8e-26 |
RESGRGVVIRGWAPQIRMLEHKAVGGFVSHCGWNSTLESVCAGVPMIMWSLSAKQFSNEKLITDVLGIGVQVGSKEWASWNMERKEVIGREKVEAAVRKV VGGGEEEVEMRKRARDLAEKAKK |
Full Sequence |
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Protein Sequence Length: 1752 Download |
MGFKAIDWYC QPEANGVWAK AVSVFGSYTP CAMNSMVICI SHLVLLGFCC YRVWMIKKNL 60 KARRFRLRSN YYNYLLGLLA GYSTAEPLLR LVMGLSLFNP FGRTGFAPFE MNSSIIEALA 120 WCSMLILIGL ETKIYIREFR WYVRFGVLYV LVGNAVVLNL ILGVTVTDAD SGSALCLYIS 180 TVCCQMLFGI LLLFYVPNLD PYPGYIVLQS ESLDNAEYEA LPGEDQIFPE RHANIFSTEN 240 VLLLAIGWDL FQFLSPILLN LLLQSMQRGD PAWIGYIYAF LIFIGVSFGV LLASQYYQNV 300 QHVGFWLRST LVAAIFRKSI RITHEGRKKF PSGKITNMMS TDADALQQTA RILHGLWSAP 360 FRIIVAMVLL YQQLGGASLI GSLMLVLTIP IQTTLFSKMR KLTKDGLQQT DKRVGLMNEI 420 LAAMDTVNAT LPFIHATQLI KSGSMGFLSV NSSVITYIYV ISFTVGDLLV NANVSLQRLE 480 ELFLTEERFL VPNPPLEPGL PAISIQDGYF SWDSKAEKPT LSNINLDIPI GSLVAVVGGT 540 GEGKTSLISA MLGELPPIKD AGVTIRGTVA YVPQVSWIFN ATVRENILFG SAFEAARYWK 600 AIDVTEFHHD LDLLPGRDLT EIGERGVNIS GGQKQRVSMA RAVYSNSDVY IFDDPLSALD 660 AHVAREIFNG CIKEELQGKT RVLVTNQLHF LPQVDEIILV SDGTIKEFGT FKDLSENSLL 720 FQKLMENAGK MDEHVEEKEH RKTDYQETSL LVSNGVVDDV PKDASYTKKQ KGMKSVLINQ 780 EERETGVAGC GAHVRTGLKC ARPSIRHRPA PTTARLHPSG LQQRPRSLSL PGESAEFQCG 840 CPSFRHRRGR ASILADSSSF HDHFPSPPNS SFPARSPKTS NKVNLVGKLE FGGLAGDGKR 900 SGKLLESAGV EARPRLHRTV VNGGKSTPAD VPPYGTGEGA PPPQQTLAAS RTTFPLDKLA 960 GEGKWSGTLL GWRRALVGGE RRDVRTLRPV RTFASDPAYI YIYTVRLCYG TDFRPFATVR 1020 KVEFGGLAGD GKWSGKLLES AGVEARPRRP RLVANGRKSA PYKHALGGLW VVMVLFTCYT 1080 LTEVLRVSSS TWLSFWTDQS TSKSYTPGFY ILIYAILSVG QSTSREVKRL DSITRSPVYA 1140 QFGEALNGLS SIRAYQAYDR MANIIGRSMD NNIRFGLNGR AENQVQFAST MGLLLTYTLN 1200 ITSLLSGVLR QASRAENSLN SVERVGTYIE LPSEAPAVIE SNRPPHGWPS SGSIKFEDVV 1260 LRYRPGLPLV LHGLSFAVSA SEKLGIVGRT GAGKSSVINA LFRIVEIVKG SILIDGCDVA 1320 KFGLADLRKV LSIIPQSPVL FSGTVRFNLD PFSEHNDADL WEALEKAHLK DVIGRKSFGL 1380 NAEVSEGGEN FSVGQRQLIS LARALLRRSK IIVLDEATAA VDVRTDSLIQ ETIREEFKSC 1440 TMLVIAHRLN TIIDCDRILL LDAGQVIEHG SPQELLLDEQ SAFSKMVRST GPSNAQYLHS 1500 LVFEDEKNKM NRNEIKQLND LQRLDIGDKD NILMKTKDAV ITLQGVLEGK HDEGNKQLIE 1560 IAHGVVNSTN CFVWVVGKVF KFENDDQSHE DEENWLVDFE KRMRESGRGV VIRGWAPQIR 1620 MLEHKAVGGF VSHCGWNSTL ESVCAGVPMI MWSLSAKQFS NEKLITDVLG IGVQVGSKEW 1680 ASWNMERKEV IGREKVEAAV RKVVGGGEEE VEMRKRARDL AEKAKKAIEE GGSSYAEVDA 1740 LISELRSLKK N* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN03130 | PLN03130 | 1.0e-10 | 519 | 729 | 228 | + ABC transporter C family member; Provisional |
PLN03130 | PLN03130 | 3.0e-27 | 1062 | 1137 | 94 | + ABC transporter C family member; Provisional |
PLN03130 | PLN03130 | 8.0e-96 | 1 | 237 | 238 | + ABC transporter C family member; Provisional |
PLN03130 | PLN03130 | 0 | 266 | 787 | 572 | + ABC transporter C family member; Provisional |
PLN03130 | PLN03130 | 0 | 1111 | 1553 | 502 | + ABC transporter C family member; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005524 | ATP binding |
GO:0006810 | transport |
GO:0008152 | metabolic process |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cbz_A | 0 | 502 | 714 | 3 | 215 | A Chain A, Structure Of The Human Multidrug Resistance Protein 1 Nucleotide Binding Domain 1 |
PDB | 2cbz_A | 1e-16 | 1253 | 1489 | 3 | 228 | A Chain A, Structure Of The Human Multidrug Resistance Protein 1 Nucleotide Binding Domain 1 |
PDB | 2pzg_B | 6.02558e-44 | 519 | 714 | 34 | 228 | A Chain A, Minimal Human Cftr First Nucleotide Binding Domain As A Monomer |
PDB | 2pzg_B | 0.00000000002 | 1250 | 1475 | 15 | 228 | A Chain A, Minimal Human Cftr First Nucleotide Binding Domain As A Monomer |
PDB | 2pzg_A | 6.02558e-44 | 519 | 714 | 34 | 228 | A Chain A, Minimal Human Cftr First Nucleotide Binding Domain As A Monomer |