| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna00382.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 529 Molecular Weight: 57746.8 Isoelectric Point: 9.5076 |
| Chromosome | Chromosome/Scaffold: 7 Start: 12716244 End: 12717925 |
| Description | root hair specific 12 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 313 | 511 | 0 |
| KDIGFRNTAGAAKHQAVALMSSADQTVFYRCRIDAFQDSLYVHANRQFYRECDIYGTVDFIFGNSAVVLQNCKVFPRVPMTGQQNTITAQGKIDPNQNTG ISFQNCTISPFGDLSSVKTYLGRPWKNYSTTVYMQTFMGSLIHPDGWLPWVGTTAPDTIFYSEYQNFGPGSVTKNRVKWKGLKTITSKVASKFTVHSFL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 529 Download |
| MSSFKAYGKV SESDQAKLDA RRKTCKRVAI ISISSIVLVC VVVAAVVGTA THNSKKGDDS 60 GKGTLSASVK AVCDVTLYQD SCYSSLGPVV NTSNFKPEDL FKLSIQVAIA ELSKAAAQIS 120 DQGLFNGTVT DKLSVEALKN CGELLGLALD HLNESLSGDG SLLEVVEDLK TWLSSAGTYQ 180 QSCVDGFDDA KGELKDTIEK YLKTSTELTS NSLAIVSWIS KVANSVKLRR LLSQDGTATS 240 HGIPEWLHQT DRRLIESSDL RKKASIVVAK DGSGKYKTIG DALKAVPDKS KKRTVIYVKK 300 GVYFENVRVE KSKDIGFRNT AGAAKHQAVA LMSSADQTVF YRCRIDAFQD SLYVHANRQF 360 YRECDIYGTV DFIFGNSAVV LQNCKVFPRV PMTGQQNTIT AQGKIDPNQN TGISFQNCTI 420 SPFGDLSSVK TYLGRPWKNY STTVYMQTFM GSLIHPDGWL PWVGTTAPDT IFYSEYQNFG 480 PGSVTKNRVK WKGLKTITSK VASKFTVHSF LLGSKWISDA SVPYKSKL* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02484 | PLN02484 | 2.0e-133 | 66 | 528 | 523 | + probable pectinesterase/pectinesterase inhibitor |
| PLN02745 | PLN02745 | 4.0e-140 | 4 | 525 | 600 | + Putative pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 8.0e-156 | 266 | 514 | 297 | + Pectinesterase. |
| PLN02468 | PLN02468 | 0 | 4 | 528 | 572 | + putative pectinesterase/pectinesterase inhibitor |
| PLN02314 | PLN02314 | 0 | 3 | 528 | 592 | + pectinesterase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 265 | 528 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 264 | 528 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 0.00000000000004 | 327 | 513 | 129 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000000000004 | 327 | 513 | 129 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.00000000000005 | 327 | 513 | 129 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
