| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna00939.1-v1.0-hybrid |
| Family | GT47 |
| Protein Properties | Length: 464 Molecular Weight: 52560.4 Isoelectric Point: 9.3594 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6350261 End: 6353888 |
| Description | Exostosin family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 90 | 386 | 0 |
| LKIYVYDEREIDGLKALMSGRDGAIDSSSCLKGQWGTQVKIHRLLQESRFRTRKKEEADLFFVPTYTKCVRMLGGLNDKEINQTYVKVLRQMPYFKRSGG RDHIFVFPSGAGAHLFRSWAKFINRSIILTPEGDRTDKKDTSAFNTWKDIIIPGNVDDGMTTDGATLVHPLPLSKRKYLANYLGRAQGKAGRLKLIELSK KFPDKLECPELKFSGPDKLGKIDYFEHLRNAKFCLAPRGESSWTLRFYESFFVECVPVILSDEVELPFQNVVDYTQISIKWPSTRIGPELLQYLESI | |||
| Full Sequence |
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| Protein Sequence Length: 464 Download |
| MLGSTNNKAR PYSAQHHQQP LCTRKHQIGA LFLVAATVFF TKLLDSSLPC SSSSFTADPL 60 ATTSRSSSVH VTNGGDLLWP QRGYGPVVDL KIYVYDEREI DGLKALMSGR DGAIDSSSCL 120 KGQWGTQVKI HRLLQESRFR TRKKEEADLF FVPTYTKCVR MLGGLNDKEI NQTYVKVLRQ 180 MPYFKRSGGR DHIFVFPSGA GAHLFRSWAK FINRSIILTP EGDRTDKKDT SAFNTWKDII 240 IPGNVDDGMT TDGATLVHPL PLSKRKYLAN YLGRAQGKAG RLKLIELSKK FPDKLECPEL 300 KFSGPDKLGK IDYFEHLRNA KFCLAPRGES SWTLRFYESF FVECVPVILS DEVELPFQNV 360 VDYTQISIKW PSTRIGPELL QYLESIPDEI IEGMISHGRQ VRCLWAYASE SASCSAMHAI 420 LWELQRKVRL FHQSTETFWL HDGSIVNRNL VKFSDWRPPM PLP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-45 | 90 | 386 | 310 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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